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SCNpilot_cont_500_bf_scaffold_803_1

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(2..1051)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 350.0
  • Bit_score: 688
  • Evalue 1.10e-195
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 350.0
  • Bit_score: 688
  • Evalue 5.00e-195
DNA-directed RNA polymerase subunit beta' n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RPOC_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 350.0
  • Bit_score: 688
  • Evalue 3.50e-195

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Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGAACGACCTGACCAAATTTACCAATCAGATGGCGAAGCCGGAAACCTTCGACCAGATCCAGATCGGTCTGGCCTCGCCCGAGCGCATCCGCAGCTGGTCCTTCGGCGAGATCAAGAAGCCGGAAACGATAAACTATCGCACGTTCAAGCCCGAGCGTGACGGCCTGTTCTGCGCGCGTATCTTCGGCCCCGTTAAGGACTATGAGTGCCTTTGCGGTAAGTATAAGCGCATGAAGTACAAGGGCGTCGTCTGCGAAAAGTGCGGCGTCGAAGTGACCGTGACCAAGGTGCGCCGCGAGCGCATGGGCCATATCGAACTGGCCGCGCCGGTCGCGCATATCTGGTTCCTCAAGTCACTGCCTTCGCGCATCGGTCTGCTGCTCGACATGCAGTTGAAGCAGCTCGAACGCATCCTGTACTTTGAATCCTATGTGGTGATCGAGCCGGGCCTGACCCCGCTTGAAAAGTACCAGTTGCTGACCGAGGACGAGCTGCTCGACTATCAGGACGAGTATGGCGAAGACGCGTTCAGCGCCGGCATCGGTGCCGAGGCGGTCAAGCACATGCTGATGAGCCTCGACATGGTTCAGGAGAAGGAAGACCTTCTCAAGGAACTGGCCGAGACCAAGTCGGAACTGAAGCCTAAGAAGATCATCAAGCGCCTGAAGGTCGTGGAATCCTTCATCGATTCGGGCAACCGCCCCGAATGGATGATCCTCGACGTGGTGCCGGTCATTCCGCCAGACCTGCGCCCGCTGGTGCCGCTGGACGGTGGCCGCTTTGCGACCTCGGACTTGAACGACCTCTATCGTCGCGTCATCAACCGTAACAACCGTCTGAAGCGCCTCATTGAACTGCGCGCGCCCGACATCATCGTGCGCAACGAAAAGCGCATGTTGCAGGAAGCCGTTGACGCCCTGTTCGACAACGGCCGCCGTGGCCGCGTCATCACGGGTGCCAACAAGCGTCCTCTCAAGTCGCTGTCCGACATGCTCAAGGGCAAGCAGGGCCGCTTCCGTCAGAACCTGCTCGGCAAGCGCGTCGACTAT
PROTEIN sequence
Length: 350
MNDLTKFTNQMAKPETFDQIQIGLASPERIRSWSFGEIKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRMKYKGVVCEKCGVEVTVTKVRRERMGHIELAAPVAHIWFLKSLPSRIGLLLDMQLKQLERILYFESYVVIEPGLTPLEKYQLLTEDELLDYQDEYGEDAFSAGIGAEAVKHMLMSLDMVQEKEDLLKELAETKSELKPKKIIKRLKVVESFIDSGNRPEWMILDVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRMLQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDY