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SCNpilot_cont_500_bf_scaffold_2051_13

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 9433..9999

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00035D50C6 similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 188.0
  • Bit_score: 343
  • Evalue 1.20e-91
  • rbh
FecI sigma-24 factor {ECO:0000313|EMBL:AKH18793.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 188.0
  • Bit_score: 220
  • Evalue 2.70e-54
rpoE; ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 188.0
  • Bit_score: 218
  • Evalue 1.80e-54

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Taxonomy

Sphingomonas sanxanigenens → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGACAGGGCAGCTCTCTGAGCTCGAAGATCAGGACTTGGCTTCGTTAGCCATCGGCGGAAACCAGGCCGCTTGTTGCGAGCTTGTCCGCCGACATCGTGATTGGGTGTACAGGCTTGTTCGCGCGCAGATCGGCGATGCGGTTGAAAGCCTGGATGTCACACAGGGGGCATTCATCGCGGCGTTTAGCGCCCTTGACCGCTTCGATCGTGCGCGCCCTTTCAAGCTATGGCTGGCTCGTATTGCTTTGAACAAGTGCAAGGACTGGAGGCGGCGTGCGCTGGTGCGCAGGTTTATGCTTGCAGCAGCCCCTTTGACGGAAGCTGAAGAGGTGGCTGATCCGGCTCCAGGAGCTGACATCACGGCCTCCGACCGATCCGAATTAAAAGTGACCCTGAAGGCAATTTCCGAATTGCCCGCTTCATTGCGCGAACCCCTCATCCTCCGGACCATTGATGCGCGCGCACAGGCGGAAACCGCGCAGATCCTAGGATTGAGCGAGAAGGCTGTCGAAGCGAGAGTTTATCGGGCGCGAGCACGCTTGGTGGACAAACTCAAAAAAATTTGA
PROTEIN sequence
Length: 189
VTGQLSELEDQDLASLAIGGNQAACCELVRRHRDWVYRLVRAQIGDAVESLDVTQGAFIAAFSALDRFDRARPFKLWLARIALNKCKDWRRRALVRRFMLAAAPLTEAEEVADPAPGADITASDRSELKVTLKAISELPASLREPLILRTIDARAQAETAQILGLSEKAVEARVYRARARLVDKLKKI*