ggKbase home page

SCNpilot_cont_500_bf_scaffold_178_8

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(5909..6871)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003625185 similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 320.0
  • Bit_score: 616
  • Evalue 1.20e-173
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 321.0
  • Bit_score: 568
  • Evalue 1.50e-159
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS21807.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 321.0
  • Bit_score: 568
  • Evalue 6.90e-159

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGCAACGTCGTCATTTCATTTCCACGCTGGCCGCTGCTTCTATCCTGCCCGGAATATCCTTCGCCCAAGGCAAGCCCATCCGCCTGGTCGTTCCCTTCCCGCCCGGCGGCGCCACCGACATCACCGCGCGCGTGCTCGGCGAGCCCGTGGCCAAGATCCTGCAGCAGCCCGTGGTCATCGACAACCGCGCCGGCGCCGGCGGCTCCATCGGCATGGCCGAGCTGGCCCGCGCCACGCCGGACGGCCTGACCTTCGGCATCGCCACCCTGTCCACGCACGGCGTGAACCCGGCGGTCTACCAGAAGCTGCCCTACGACCCGATCAAGGGCTTCGCCGCCGTGACCGAGATCGTCAAGGCGCCGGGCGTGATCGTCATCAACCCGACGAAGCTGCCGGTGGCCAACTTCGCCGAGCTGGTGAAGTACCTGAAGGCCAACCCGGGCAAGGTGTCGTACGCCACGCCGGGCAACGGCACCATCGGCCACATGTGGGGCGAACTGTTCAAGAGCACCACCGGAACCTCGATGGTGCACATCCCCTACCGCGGTGCGGGCCCGGCCATCAACGACGTGCTCGCAGGCGAAGTGCCGGTGTACTTCGACCAGGTGGCCTCGTCGCTGCCGCACGTGAAGGCAGGCAAGCTGAAGGCGCTGGCCGTGTCGTGGAACGGCCGCCTCGACGTGCTGCCCGACGTGCCCACCTATGGCGAGCTGGGCTACCCGACCAACAACGATCCGTCGTGGTTCGGCATGGTCGCGCCCGCGGGCACGCCGGCCGAGCTGGTGCTGCGCATGCAGCAGGCCGTGGCCACCGCGCTGAAGGACGCCTCGGTGCGCGAGCGCCTGGCGCTGCAGGGCCTGTACGCCTCGGGCACCACGCCGGCGCAGTTCACCAAGCAGATCGCCAGCGAAATCGACAAGATGAAGAAGGTGGCCGAATTCGCACGCGTGCGATTGGACTGA
PROTEIN sequence
Length: 321
MQRRHFISTLAAASILPGISFAQGKPIRLVVPFPPGGATDITARVLGEPVAKILQQPVVIDNRAGAGGSIGMAELARATPDGLTFGIATLSTHGVNPAVYQKLPYDPIKGFAAVTEIVKAPGVIVINPTKLPVANFAELVKYLKANPGKVSYATPGNGTIGHMWGELFKSTTGTSMVHIPYRGAGPAINDVLAGEVPVYFDQVASSLPHVKAGKLKALAVSWNGRLDVLPDVPTYGELGYPTNNDPSWFGMVAPAGTPAELVLRMQQAVATALKDASVRERLALQGLYASGTTPAQFTKQIASEIDKMKKVAEFARVRLD*