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SCNpilot_cont_500_bf_scaffold_178_9

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 6983..7921

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00037C3910 similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 311.0
  • Bit_score: 607
  • Evalue 5.40e-171
  • rbh
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 307.0
  • Bit_score: 591
  • Evalue 2.20e-166
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU52464.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 307.0
  • Bit_score: 591
  • Evalue 9.60e-166

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGTCGCTGCGTCGTCTCAATCCTCCGCTGAACCTGTTGCGCGCCTTCTCGACCGTGGTGCGCTTCGGCGGTGTTTCTCGCGCGGCAGAGGCCCTGCACCTCACGCAGGGCGCGGTCAGCAAGCAGGTGCAGGAGCTCGAGCGCTGGATCGGCGCGCCGCTGTTCGAGCGCAACCGCAAGCGCCTGGCGCTCACGCCGGCCGGCGAGCGCTACGAGAAGGCGGTGCGCGCGCTGCTCGCGCAACTGGAGGCGGCCACGCTGGAACTCATCACCAGCGGCGACGGCGGCGGCGCGCTGCACCTGTCGACCCTGCCCACCTTCGGTGCCAAGTGGCTGATTCCGCGGCTGCCCGACTTCCAGCGCGCGCATCCGCAGATCACGCTGCATTTCGTGCCTTTCGTGCACGGCTACGACTTCGAACGGCCCGAGCTCGACTGCGCCATTCTTTTCGGCGACGGCCACTGGCCCGGCGCGCAGTCGCACTACCTCGCGGGCCAGGACGTGGCGCTGATCGCGCCGCGCGCCGCGCAGGCCGAGGTCGCCATCCGCACGCCGCAGGACGTGGCGCGCTGCACGCTGCTGCGCCATGTCACGGTGCCGCAGTCGTGGCTGCAGTGGAGCGAGACGCACGGCGTGCGCGGGCTCGACCCGCTGGCCGGTCCGCAGTTCGACCAGTTCCAGACCATGATCCGCGCGGTGATGGTCGGCATGGGCGTGGCGCTGGTGCCGCGCTGCCTGGTGCAGGACGAGATTTCTTCAGGACTGGTGGACGAGCCGCTGCCGGGCGGCGGCTACCGCGGCAACGAGGGCTACTGGTTCTGCTACCCGGAAGGGCGCGGCCAGCTCGCCACGCTCGATCATTTCCGCAGCTGGCTGCTGGCGGAAGTCGACCGCGCGAAAGAGGCGATGCCCGCCGCGGCGGGGCCGGTGCCGCGCTGA
PROTEIN sequence
Length: 313
MSLRRLNPPLNLLRAFSTVVRFGGVSRAAEALHLTQGAVSKQVQELERWIGAPLFERNRKRLALTPAGERYEKAVRALLAQLEAATLELITSGDGGGALHLSTLPTFGAKWLIPRLPDFQRAHPQITLHFVPFVHGYDFERPELDCAILFGDGHWPGAQSHYLAGQDVALIAPRAAQAEVAIRTPQDVARCTLLRHVTVPQSWLQWSETHGVRGLDPLAGPQFDQFQTMIRAVMVGMGVALVPRCLVQDEISSGLVDEPLPGGGYRGNEGYWFCYPEGRGQLATLDHFRSWLLAEVDRAKEAMPAAAGPVPR*