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SCNpilot_cont_500_bf_scaffold_690_1

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 532..1533

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003682063 similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 327.0
  • Bit_score: 576
  • Evalue 2.40e-161
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 324.0
  • Bit_score: 561
  • Evalue 2.00e-157
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS21865.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 324.0
  • Bit_score: 561
  • Evalue 8.70e-157

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGAAGCCTGTCTTCATAATGAAAGCCATGTCGCCAGACCTGCTCCCCGCCATTTCCGCCTTCGCCCGCGTGGCCCATCACGCCAGCTTCACGCGTGCCGCGGAGGAACTGGGCGTATCGCCATCGGCCCTGTCGCAGACGCTGCGCGCGCTGGAGCAGCGCCTGGGCGTGCGCCTGCTCGACCGCACCACGCGGCGCGTGGGCGTCACCGAACTGGGGCTGCAGTTGCTGAACGGCGCGCGCCCGGCGCTCGATGCGCTGGCCCAGGCGGTGGAAGGCCTCGACGAGGCACGCGACAAGCCCGCGGGCCTGCTGCGGCTGAACGTCTCGCGGGTGGCGGCCGAGCTGCTGCTCTTCGCGCACATGGGCGACTTCGCCGATGCCTGGCCGGACATCACGCTCGAGCTGGTGTGCGACAACCGCATGGTCGACCTGGTGGAAGGCGGCTTCGACGCCGGCATCCGGCTCGGCGAAAGCCTGGCGCAGGACGTGGTCGCCGTGCCGGTGGGCGGCCCGCTGCGCATGGTCACCTTTGCCGCGCCGCGCTACCTGAAGGGCCGCAAGCCGCCGCGCGTGCCCGAAGACCTGCGCGAGCACCGGTGCCTGAACTACCGCCTGACCACGGGCGGCCTCTATCGCTGGGAATACGCGCAGGACGGGCGCGTGCTGGACATCGCGTTGCCCGGCCCGCTGATCAGCAACGACAGCGAGGTGTTGCTGGCGGCGGCGCGCGCGGGTGCCGGCATCACATCGGCTTTCGAAGGCGCGGTGCGCGAAGATTTCGAGAGCGGCCGCCTCGTGCCGCTGCTGGAGCCCTGGTGGCCGATTTTTCCGGGCTTCTACCTGTACCACCCGAGCCGCGCGCAGATGCCGCGCAAGCTGCGGGTGTTCATCGACTTCCTGCAGGCGCGGCATGCGCCGCCGCCGGTGTCGCAGCGGGCCGTCAGGCTCGCATCAGCGCCTCGATCTCGTCCGCCTTCACCGGCACGCCGCGCGAAATGA
PROTEIN sequence
Length: 334
MKPVFIMKAMSPDLLPAISAFARVAHHASFTRAAEELGVSPSALSQTLRALEQRLGVRLLDRTTRRVGVTELGLQLLNGARPALDALAQAVEGLDEARDKPAGLLRLNVSRVAAELLLFAHMGDFADAWPDITLELVCDNRMVDLVEGGFDAGIRLGESLAQDVVAVPVGGPLRMVTFAAPRYLKGRKPPRVPEDLREHRCLNYRLTTGGLYRWEYAQDGRVLDIALPGPLISNDSEVLLAAARAGAGITSAFEGAVREDFESGRLVPLLEPWWPIFPGFYLYHPSRAQMPRKLRVFIDFLQARHAPPPVSQRAVRLASAPRSRPPSPARRAK*