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SCNpilot_cont_500_bf_scaffold_690_7

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 6856..7200

Top 3 Functional Annotations

Value Algorithm Source
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 114.0
  • Bit_score: 228
  • Evalue 4.60e-57
gapA; glyceraldehyde-3-phosphate dehydrogenase GapA (EC:1.2.1.12) similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 114.0
  • Bit_score: 225
  • Evalue 1.10e-56
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Variovorax sp. CF313 RepID=J3CW11_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 114.0
  • Bit_score: 228
  • Evalue 3.30e-57

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
GTGATCCCCGAGCTCAACAAGAAGCTCACCGGCATGAGCTTCCGCGTGCCGACCTCCGACGTGTCGGTGGTCGACCTGACGGTCGAGCTGGTGAAGGAAGCCACGTACAAGGAAATCTGCGCCGAGATGAAGGCACAGAGCGAAGGCGCGCTCAAGGGCGTGCTGGGCTACACCGAAGACAAGGTCGTGGCCACCGACTTCCGCGGCGACCCGCGCACCTCGATCTTCGACGCCGAAGCCGGTATTGCGCTGGACGGCACCTTCGTCAAGCTCGTGAGCTGGTACGACAACGAATGGGGCTACTCGAACAAGTGCCTCGAAATGGTGAAGGTCGTGTCGAAGTAA
PROTEIN sequence
Length: 115
VIPELNKKLTGMSFRVPTSDVSVVDLTVELVKEATYKEICAEMKAQSEGALKGVLGYTEDKVVATDFRGDPRTSIFDAEAGIALDGTFVKLVSWYDNEWGYSNKCLEMVKVVSK*