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SCNpilot_cont_500_bf_scaffold_690_21

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(19830..20774)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI000371B567 similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 294.0
  • Bit_score: 479
  • Evalue 2.20e-132
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL79643.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 309.0
  • Bit_score: 475
  • Evalue 4.60e-131
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 306.0
  • Bit_score: 463
  • Evalue 6.80e-128
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGAACACGCCATCCATGCTCGACCTCAACGACATCGCCATGTTCGTGCAGGTGGTGCGCTACGGCAGCTTCGCCGAGGCGGCGCGCCGCCTGGGCGTGCCGCCGAACACGCTCAGCCGGCGCATCCAGCAGCTCGAATCGCAGCTGGGTACGCGGCTGATGCAGCGCTCCACGCGCAAGCTGACGCTGACCAGCGCGGGGCAGGATTTCCATGACCGGTGCGCGGGGGCGGTGGACGGGCTGGTGGCGGCCGGGCAGGAGTTGGTGGCTGGGGGGCAGGCGCCGAGTGGGCTGGTGCGGGTAGCGGCTACCGCAGACTTTTTTGACTTCTTTCCCATGGAGTGGGTCGCGGAGTTCTTGCGAACCCACCCGCTGGTTCGACTGGACTTCGTGCTCAGCGATGCAGTGGTCGATCTGATCGCGGAGAACATCGACATCGCCTTTCGCGGCGGCCCGCTGAGCGACTCCAGCTATGTTGCGCGTCGGCTTGTCACCCGCAGCGGTGGCTTGCTTGCGAGCCCCGCATACATCGCTGCTCGCGGCGCGCCCACGACCTTGCAGGATCTGGCGCACCACGATTGCGTAACGGCCGCCCATCCAAGCGGTCATGCCACATGGCGATTGACCGGTCCCGACGGTATGGAGGAAGAAGTTCAGGTCAAAGGCCGATTTACGGGCAATACCGCGCAAGCACTGCGCAAGGCCACGCTGGCCGGGCTTGGCGTCGCACTGCTCCCGCCCGCGATGGCGACGTCTGACGAGCAAGCCGGGTTGTTGGTGCCTGTCCTGCCGCAATACCAATACCAGGGCCGAGGGCTGAACGTGGTTTATCCGAGCCGCAAGCACCTGCCGCTCGCGGTGTCGGCCTTTATCGAACTGGTAATAGAGAAGTTGGAAGGCAACCCGGAGATCTTTCCAACCGCATTGCGGCCACACCAGTCCTAG
PROTEIN sequence
Length: 315
MNTPSMLDLNDIAMFVQVVRYGSFAEAARRLGVPPNTLSRRIQQLESQLGTRLMQRSTRKLTLTSAGQDFHDRCAGAVDGLVAAGQELVAGGQAPSGLVRVAATADFFDFFPMEWVAEFLRTHPLVRLDFVLSDAVVDLIAENIDIAFRGGPLSDSSYVARRLVTRSGGLLASPAYIAARGAPTTLQDLAHHDCVTAAHPSGHATWRLTGPDGMEEEVQVKGRFTGNTAQALRKATLAGLGVALLPPAMATSDEQAGLLVPVLPQYQYQGRGLNVVYPSRKHLPLAVSAFIELVIEKLEGNPEIFPTALRPHQS*