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SCNpilot_cont_500_bf_scaffold_37

Search features with annotation key words

Displaying items 61-90 of 457 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_37_61
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64732..65025)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K738_AZOSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL94643.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
SCNpilot_cont_500_bf_scaffold_37_62
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65165..66625)
DNA (1461bp) protein (487aa)
UPI0003D68E4B related cluster n=1 Tax=unknown RepID=UPI0003D68E4B rbh
Protease TldD {ECO:0000313|EMBL:CKH12571.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
TldD protein, part of proposed TldE/TldD proteolytic complex (PMID 12029038 rbh
SCNpilot_cont_500_bf_scaffold_37_63
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66675..67493)
DNA (819bp) protein (273aa)
hydrolase (EC:3.5.5.1); K01501 nitrilase [EC:3.5.5.1] rbh
Putative hydrolase {ECO:0000313|EMBL:CAP43082.1}; EC=3.5.5.1 {ECO:0000313|EMBL:CAP43082.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
Putative hydrolase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IQP5_BORPD rbh
SCNpilot_cont_500_bf_scaffold_37_64
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67549..71616)
DNA (4068bp) protein (1356aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003766472 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIF80660.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_37_65
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71780..74557
DNA (2778bp) protein (926aa)
glnE; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase (EC:2.7.7.42); K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] rbh
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / D
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IJX3_BORPD rbh
SCNpilot_cont_500_bf_scaffold_37_66
Pseudomonas sp. ES3-33, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74767..75333
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI00036035D5
Glyoxalase {ECO:0000313|EMBL:KJH76736.1}; TaxID=1628833 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. ES3-33.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_37_67
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75330..76073
DNA (744bp) protein (248aa)
IclR family transcriptional regulator n=1 Tax=Burkholderia kururiensis RepID=UPI0003462426
IclR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCNpilot_cont_500_bf_scaffold_37_68
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76134..77117
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00030CC8CD rbh
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
SCNpilot_cont_500_bf_scaffold_37_69
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77140..79536)
DNA (2397bp) protein (799aa)
Ferrichrome receptor FcuA 1 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HEQ2_ACHXA
ferrichrome receptor FcuA 1; K02014 iron complex outermembrane recepter protein
Ferrichrome receptor FcuA 1 {ECO:0000313|EMBL:ADP16461.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCNpilot_cont_500_bf_scaffold_37_70
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79620..80576)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3HHX4_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:EQM70684.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
fecR7; protein FecR
SCNpilot_cont_500_bf_scaffold_37_71
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80578..81069)
DNA (492bp) protein (164aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SZL5_JANMA
fecI6; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:ABR90393.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
SCNpilot_cont_500_bf_scaffold_37_72
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81172..81522)
DNA (351bp) protein (117aa)
Putative conserved inner membrane protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I8K0_BORPD
inner membrane protein
Putative conserved inner membrane protein {ECO:0000313|EMBL:CAP41255.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_cont_500_bf_scaffold_37_73
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81519..82457)
DNA (939bp) protein (313aa)
AzlC protein n=31 Tax=Bordetella RepID=V8TXY0_BORPT rbh
hypothetical protein rbh
Putative inner membrane protein {ECO:0000313|EMBL:CAE43660.1}; TaxID=257313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251).;"
SCNpilot_cont_500_bf_scaffold_37_74
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82474..83394
DNA (921bp) protein (307aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:CCN24545.1}; EC=2.6.1.42 {ECO:0000313|EMBL:CCN24545.1};; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
branched-chain amino acid aminotransferase n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037BC316 rbh
ilvE; branched-chain amino acid aminotransferase rbh
SCNpilot_cont_500_bf_scaffold_37_75
Bordetella avium, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83410..83607
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KW28_BORA1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ50374.1}; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella avium (strain 197N).;"
SCNpilot_cont_500_bf_scaffold_37_76
Bordetella avium, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83711..84565
DNA (855bp) protein (285aa)
purU; formyltetrahydrofolate deformylase (EC:3.5.1.10); K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10]
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella avium (strain 197N).;"
Formyltetrahydrofolate deformylase n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KVR4_BORA1
SCNpilot_cont_500_bf_scaffold_37_77
Bordetella holmesii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84566..85015
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Bordetella holmesii RepID=M5NRH4_9BORD
SnoaL-like domain protein {ECO:0000313|EMBL:KAK80335.1}; TaxID=1331212 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella holmesii CDC-H809-BH.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_37_78
Bordetella avium, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85034..86080
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KW07_BORA1 rbh
hypothetical protein; K07019 rbh
Uncharacterized protein {ECO:0000313|EMBL:CAJ50376.1}; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella avium (strain 197N).;"
SCNpilot_cont_500_bf_scaffold_37_79
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86164..87849
DNA (1686bp) protein (562aa)
thiamine pyrophosphate protein (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002FA330F rbh
Thiamine pyrophosphate protein {ECO:0000313|EMBL:AGW90497.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
SCNpilot_cont_500_bf_scaffold_37_80
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87842..88462
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I8N1_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP41267.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_cont_500_bf_scaffold_37_81
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88349..89362)
DNA (1014bp) protein (338aa)
dapA1; dihydrodipicolinate synthase (EC:4.2.1.52); K01714 dihydrodipicolinate synthase [EC:4.2.1.52] rbh
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HLX4_ACHXA rbh
SCNpilot_cont_500_bf_scaffold_37_82
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89359..89625)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X8G7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFF76904.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_37_83
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89799..91298)
DNA (1500bp) protein (500aa)
Peptidase, M48 family {ECO:0000313|EMBL:EFF76985.1}; EC=3.4.24.- {ECO:0000313|EMBL:EFF76985.1};; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
Peptidase, M48 family n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X855_9BURK rbh
Peptidase M48, Ste24p precursor rbh
SCNpilot_cont_500_bf_scaffold_37_84
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91415..92275
DNA (861bp) protein (287aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2); K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] rbh
3-mercaptopyruvate sulfurtransferase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TS36_ACIAC rbh
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
SCNpilot_cont_500_bf_scaffold_37_85

Not on your lists

92275..92754
DNA (480bp) protein (160aa)
Molybdenum cofactor biosynthesis protein C n=1 Tax=mine drainage metagenome RepID=E6PWI5_9ZZZZ
Molybdenum cofactor biosynthesis protein C {ECO:0000313|EMBL:CBH99292.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
moaC; MoaC; K03637 molybdenum cofactor biosynthesis protein C
SCNpilot_cont_500_bf_scaffold_37_86
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92791..93843)
DNA (1053bp) protein (351aa)
peptidase T4 n=1 Tax=Gluconacetobacter europaeus RepID=UPI00030008E9 rbh
L-aminopeptidase/D-esterase {ECO:0000313|EMBL:GAJ29984.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
dmpA; peptidase S58, DmpA rbh
SCNpilot_cont_500_bf_scaffold_37_87
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93920..94414)
DNA (495bp) protein (165aa)
Transcriptional regulatory protein MarR family n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G6S4_9BRAD
Transcriptional repressor MprA {ECO:0000313|EMBL:EWS66104.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
transcriptional regulatory protein MarR family
SCNpilot_cont_500_bf_scaffold_37_88
Synechococcus elongatus, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(94418..95767)
DNA (1350bp) protein (450aa)
codA; cytosine deaminase (EC:3.5.4.1); K01485 cytosine deaminase [EC:3.5.4.1]
Cytosine deaminase n=1 Tax=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) RepID=Q5N3H6_SYNP6
Cytosine deaminase {ECO:0000313|EMBL:ABB56600.1}; TaxID=1140 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2).;"
SCNpilot_cont_500_bf_scaffold_37_89
bacterium YEK0313, Bacteria

Not on your lists

comp(95764..96555)
DNA (792bp) protein (264aa)
ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13GV6_BURXL
Putative aliphatic sulfonates transport permease protein SsuC {ECO:0000313|EMBL:CEJ14520.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein; K02050 NitT/TauT family transport system permease protein
SCNpilot_cont_500_bf_scaffold_37_90
bacterium YEK0313, Bacteria

Not on your lists

comp(96552..97316)
DNA (765bp) protein (255aa)
UPI0003CEAED2 related cluster n=1 Tax=unknown RepID=UPI0003CEAED2
Aliphatic sulfonates import ATP-binding protein SsuB {ECO:0000313|EMBL:CEJ14521.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein
Displaying items 61-90 of 457 in total

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