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SCNpilot_cont_500_bf_scaffold_29457_4

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(1511..1996)

Top 3 Functional Annotations

Value Algorithm Source
Cation diffusion facilitator family transporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4L5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 154.0
  • Bit_score: 279
  • Evalue 3.00e-72
Cation transporter {ECO:0000313|EMBL:KIZ44766.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 161.0
  • Bit_score: 328
  • Evalue 6.00e-87
Co/Zn/Cd efflux system component similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 150.0
  • Bit_score: 211
  • Evalue 1.80e-52

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
TTCGAAGAGCACGATCACGATGCGCCAGCGGGCGCTCATCATCGTGACAACAACATGCGTGCCGCGGTCGTTCACGTGGCGGCCGACGCCGCCGTTTCGGTGCTGGTGATTGTCGGACTTCTCCTCGCGCGCACCTTCGGATGGCTCTGGATGGATCCGCTCGCCGGCCTTATCGGCGCCGTCGTCATCGCAAACTGGTCGTTCGGACTTTTACGCGATACCGGCGGCATATTGCTGGACCGCAATCCGGACCCGCGGATGGCGGAAAAGGTCAGACAGACGATCGAGCGCGACGGAGATCGGGTGACCGACCTGCACCTTTGGCGGCTGGGACCCGGACACCTTGGAGCAATCGTCGCCATCGCCACCGAGAAACGCCGCGAAGCCGAATATTATCGCCGCATGCTTGGCAAGTTCGGCGATTTGTCCCACGTTACAATCGAGGTCAGTGATCAGGCGACGCGGCTAGTGCGACGGGATCAATAA
PROTEIN sequence
Length: 162
FEEHDHDAPAGAHHRDNNMRAAVVHVAADAAVSVLVIVGLLLARTFGWLWMDPLAGLIGAVVIANWSFGLLRDTGGILLDRNPDPRMAEKVRQTIERDGDRVTDLHLWRLGPGHLGAIVAIATEKRREAEYYRRMLGKFGDLSHVTIEVSDQATRLVRRDQ*