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SCNpilot_cont_500_bf_scaffold_1404_19

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 19793..20617

Top 3 Functional Annotations

Value Algorithm Source
RteC protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8X3_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 274.0
  • Bit_score: 483
  • Evalue 1.40e-133
Uncharacterized protein {ECO:0000313|EMBL:GAE64117.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 273.0
  • Bit_score: 495
  • Evalue 6.30e-137
Tetracycline regulation of excision, RteC similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 273.0
  • Bit_score: 440
  • Evalue 3.20e-121

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Taxonomy

Chryseobacterium indologenes → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 825
ATGGACAAATTCTACAAAGAAACACTCTCTAAACTGGAATTAGAAATTAGCGAATTGGAGGTTGAAGTCGATTGCTCCTTACAACGTATTGAAGCTGCCATACACCTTATTCTCGAATGCCTTTCGGAATTAAAGGAATACGTTTTGAAAAAAGGATTTAAGAATACTAATGAAGAAATCCGCTTTTTCAAATCTCAGAAACCTGTTATTGTTTCAAAGCTCATCTACTACAACGCCATTTATAAAATAGAAACGAGAAGACCGTATGGGAATAAGCGCATCAGGAAATATTTTATCAAAGAACTGAAAAAGCTAAAAAGGTTCTTTGATAACAACCTTGATTTTTATAAGTATTACCGAAGCAATAATTCTTTTGTGGATGAAAAAATATTTGTACGGGGAAAACACGATATAAGGCTATGGTTAGATACCTTTTATTTTGAGGCAGACCATACTTTTTCTACTTCGCACGATTATAAGGTTGCCAAGATAATTGCCAATGATCTGATACAGGTTTATTTGGAAGACAAGTTGAATAACCTTAATCTAAAAAAGACTTCAGAAAATTCGTTGAAATGGACGGCAAGCAAAACAGCACTGACGGAACTTATTTATGCACTATATTCCCAAAGTGTATTTAACAATGGGAATACAGACATAAAATTGATTGCTAAAGCATTTGAAGATGCCTTTAATATTGAATTAGGTGATTTCTATCACACGTTTATGGAACTGAAAGCCCGCAAAATAAACCGAACGAAATTCCTTGACAATCTATGTGAAGCACTGATTAAAAAAATGGACGAACAAGACGAAAAACAGTAA
PROTEIN sequence
Length: 275
MDKFYKETLSKLELEISELEVEVDCSLQRIEAAIHLILECLSELKEYVLKKGFKNTNEEIRFFKSQKPVIVSKLIYYNAIYKIETRRPYGNKRIRKYFIKELKKLKRFFDNNLDFYKYYRSNNSFVDEKIFVRGKHDIRLWLDTFYFEADHTFSTSHDYKVAKIIANDLIQVYLEDKLNNLNLKKTSENSLKWTASKTALTELIYALYSQSVFNNGNTDIKLIAKAFEDAFNIELGDFYHTFMELKARKINRTKFLDNLCEALIKKMDEQDEKQ*