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SCNpilot_cont_500_bf_scaffold_720_2

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: 430..3927

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 999.99
  • Bit_score: 2172
  • Evalue 0.0
  • rbh
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 999.99
  • Bit_score: 2172
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y5Z6_MESOW similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 999.99
  • Bit_score: 2172
  • Evalue 0.0
  • rbh

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Taxonomy

Mesorhizobium opportunistum → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3498
ATGAGCCTCATACCCACCATCGGCCTGCCGAAGGATCGCGCCGGCCAGTTCATCGTCGACGGTGTCGCCGATGGCTACGAAGCCTTCGCGCTGATCCAGGCCGCGCATGAGATCGCGTCGGACCGCCCCGTGCTGTTCGTGGCCCGCGACGGTCAGCGCCTGCCGGCGATCATCGAGGCACTGTCATTCGCCTCACCCGGCCTGCCGGTGCTCGAACTGCCGGCCTGGGACTGCCTGCCCTACGACCGCGTCTCTCCAGGCGCCGATGCGGCCGCCCGGCGCCTGGACGCGCTGACCGCGATTATCGCGCTGGCCCGCAAACCGCACCGCGCGGTGATCCTGACGACCGCCAATGCCCTGTTGCAGCGCGTGCCGCCGGCCGCCCTGGTCGAGGCGCAGACGTTCCATGCCCGGCCCGGCAACCAGATCGACATGAACGCACTCATCGCGCGACTGGAGAATTCCGGCTTCGAGCGCGTGCCGACGGTGCGCGGCGTGGGCGAGTTCGCCGTTCGCGGCGGTATCCTCGATCTCTTCGCGCCGGGCTGGACGGAAGCGCTCCGGCTCGACTTCTTCGGCGATACGCTGGAATCGATCCGCGCGTTCGACATCGCTACCCAGCGCACCACCGGCCAGCGCAAATCCATGGCGCTGCAGGCGATGAGCGAGGTGGCGCTGACGCCGGAGACCATCAGCCGCTTTCGCCGGGCCTATATCGAGGCCTTCGGCGCGCCGTCGCGCGATGATGGGCTCTATACAGCGGTCAGCGAAGGCCGCCGCTTCGCCGGTATGGAACATTGGCTGCCGTTCTTCTACGAGCGGCTGGAGACCGTTTTCGACTATCTGCCGGACGCGCCTGTCGTCTTCGATCATCTGGCGCATGAGGCGCTGGCCGAACGCCATACGCTGATCCTCGACCACTATGAGGCGCGCCGGAAGCAGGCCGATGGCGCGCTCAAGGACGCGGTGCCCTACAAGCCGGTGGCGCCGGACCTGCTTTATCTCTCGCCGGAAAACCTGATTGCGTCGCTCGGGCCCCGCGAGGTGATCGACTTCACGCCGTTCGACCAGCCGGAAGGCGGTGGCCGGAAGGTCTACCATGCCTTGTCGCGGCAAGGCCGGGCCTTCGTCGAGGAGAGGGCCGACCCCAATATCAACGTCTTCGACGTCGTCGTCCGTCACATCGCAGACGAGCGCGCCGCCGGGCGGCGCGTGATCATTGCGGGATGGACGGAAGGATCGCTCGACCGGCTGGGCCAGATCCTGGCCGAGCACCATCTCGGCAATCTCAAGCCGACCGCGACCCTTGCCGATGTCGACAGGCTGGAGCCGGGGCAGGCGGCGCTTGCCGTGCTGCCGCTCGAATCCGGCTTCGAGACCGACAGGCTGGTGGTGGTCGCAGAGCAGGACATCCTTGGCGATCGCCTGATCCGGCGCTCCAAGCGCAAGAAGCGCGCGTCCGATTTCATCGCCGAGGCATCCGCCCTGTCGTCGGGCGACATCGTCGTCCACGCCGACCATGGCATCGGCCGTTTCATCGGCCTGCGCACCATCGAGGCGGTCGGCGCGCCGCATGACTGCCTGGAAATCCACTATGCTGGCGACGACCGGCTGTTCCTGCCGGTCGAGAACATCGAGCTTCTGTCTCGCTACGGCTCGGACTCGGCTGAAGCCACGCTCGACAAGCTCGGCGGCGGCGCCTGGCAGGCGCGCAAGGCGCGGCTCAAGCGCCGGCTGCTCGACATGGCGGGGCAACTGATCCGCATCGCCGCCGAGCGGCAGATGCGCGCGGCACCGGCGCTGGTGCCGGCCGATGGGCTCTACGACGAATTCGCCGCGCGTTTCCCCTATGAGGAGACGGACGACCAACAGACGGCGATCGACTCCGTGCGCGACGATCTCGGGGCGGGCAAACCGATGGACCGGCTGATCTGCGGTGACGTCGGCTTCGGCAAGACCGAAGTCGCGCTGCGCGCCGCCTTCATCGCCGCCATGGAGGGCTTCCAGGTGGCCGTCGTGGTGCCGACCACGCTCCTGTCGCGGCAGCACTTCAAGACTTTCTCGCAGCGCTTCTCAGGTCTGCCGATCCGTGTGGCCCAGGCCTCGCGGCTGGTCGGCGCGAAGGAACTGGCCGAGACTAAAAAGGCGCTGGCCGAAGGGCAGGTCGATATCGTCGTCGGCACCCACGCGCTGCTCGGCTCGTCGATTTCGTTCAAGAATCTCGGCCTGCTGATCATCGACGAGGAGCAGCATTTCGGCGTCAAGCACAAGGAACGCCTGAAGGAGCTGAAGAGCGACGTCCACGTGCTGACACTGTCAGCAACACCGATCCCGCGCACGTTGCAACTGGCTCTGACGGGCGTGCGCGAACTGTCGCTAATCGCGACGCCACCGGTCGACCGCATGGCCGTGCGCACCTTCATCTCGCCGTTCGATCCGCTGGTCATCCGCGAAACTCTGTTGCGCGAGCGCTATCGCGGCGGTCATTCCTTCTACGTCGTGCCACGGATAAGCGATCTCGCTGAAATCCATGATTTCCTCAGGGAATCCGTCCCTGAGCTGAAGGTCGCCGTAGCTCACGGCCAGATGCCGCCGGGCGAGCTCGACGACATCATGAATGCCTTCTACGACGGCCAATACGACGTGCTGCTGTCGACCACCATCGTGGAGTCCGGCCTCGACATCCCGACCGCCAACACGCTGATCATCCATCGCGCCGACATGTTCGGCCTGTCGCAGCTCTACCAGCTGCGCGGCCGCGTCGGTCGCTCGAAGGTGCGCGCCTACGCGCTCTTCACTCTGCCGGCCAATCGCAAGCTGACGGATACCGCCGAACGGCGACTGAAGGTGCTCCAGTCGCTCGACACGCTCGGAGCTGGCTTTCAGCTCGCCAGCCACGATCTCGACATCCGCGGCGCCGGCAATCTCCTTGGCGAGGAGCAGTCAGGCCACATCAAGGAGGTCGGCTTCGAGCTCTACCAGCAGATGCTGGAGGAGGCGGTGGCCGAGGTGAAGGATGCGGGCGAGGTTCAGGATGGCGGCTGGTCGCCGCAGATCTCCGTCGGTACGGCGGTGATGATCCCCGAAAGCTACGTGCCGGATCTGCAACTGCGCCTGGCGCTCTATCGCCGCCTCGGCGATCTCGAGGGCACCGAGGAAATCGACGCCTTCGGCGCGGAGCTTATCGACCGGTTCGGTCCGTTGCCGGAGGAGGTCAAGCACCTGCTCAAGATCGTCTTCATCAAGGCGCTCTGCCGCAAGGCCAATGTCGAGAAGCTCGACGCCGGGCCGAAGGGTGTGGTCATCCACTTCCGCAAGAAGGAATTCCCGGAACCGGCGGGGCTGGTGAGATTCATCGGCGAACAGGGTTCGCTGGCCAAGATCAGGCCCGACCACAGCATCGTCTTCATCCGTGAATGGCCAACACCCGAAAAGCGGCTGGCCGGCTCGGCGGTGGTGATGACGCAACTGGCCCGGCTGGTGGAGAAAGCCGCCTAA
PROTEIN sequence
Length: 1166
MSLIPTIGLPKDRAGQFIVDGVADGYEAFALIQAAHEIASDRPVLFVARDGQRLPAIIEALSFASPGLPVLELPAWDCLPYDRVSPGADAAARRLDALTAIIALARKPHRAVILTTANALLQRVPPAALVEAQTFHARPGNQIDMNALIARLENSGFERVPTVRGVGEFAVRGGILDLFAPGWTEALRLDFFGDTLESIRAFDIATQRTTGQRKSMALQAMSEVALTPETISRFRRAYIEAFGAPSRDDGLYTAVSEGRRFAGMEHWLPFFYERLETVFDYLPDAPVVFDHLAHEALAERHTLILDHYEARRKQADGALKDAVPYKPVAPDLLYLSPENLIASLGPREVIDFTPFDQPEGGGRKVYHALSRQGRAFVEERADPNINVFDVVVRHIADERAAGRRVIIAGWTEGSLDRLGQILAEHHLGNLKPTATLADVDRLEPGQAALAVLPLESGFETDRLVVVAEQDILGDRLIRRSKRKKRASDFIAEASALSSGDIVVHADHGIGRFIGLRTIEAVGAPHDCLEIHYAGDDRLFLPVENIELLSRYGSDSAEATLDKLGGGAWQARKARLKRRLLDMAGQLIRIAAERQMRAAPALVPADGLYDEFAARFPYEETDDQQTAIDSVRDDLGAGKPMDRLICGDVGFGKTEVALRAAFIAAMEGFQVAVVVPTTLLSRQHFKTFSQRFSGLPIRVAQASRLVGAKELAETKKALAEGQVDIVVGTHALLGSSISFKNLGLLIIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLALTGVRELSLIATPPVDRMAVRTFISPFDPLVIRETLLRERYRGGHSFYVVPRISDLAEIHDFLRESVPELKVAVAHGQMPPGELDDIMNAFYDGQYDVLLSTTIVESGLDIPTANTLIIHRADMFGLSQLYQLRGRVGRSKVRAYALFTLPANRKLTDTAERRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVAEVKDAGEVQDGGWSPQISVGTAVMIPESYVPDLQLRLALYRRLGDLEGTEEIDAFGAELIDRFGPLPEEVKHLLKIVFIKALCRKANVEKLDAGPKGVVIHFRKKEFPEPAGLVRFIGEQGSLAKIRPDHSIVFIREWPTPEKRLAGSAVVMTQLARLVEKAA*