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SCNpilot_cont_500_bf_scaffold_4225_3

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: 661..1323

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease family protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L6V1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 211.0
  • Bit_score: 225
  • Evalue 4.10e-56
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJJ29242.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 211.0
  • Bit_score: 225
  • Evalue 5.80e-56
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 211.0
  • Bit_score: 220
  • Evalue 5.40e-55

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGCCCATACACTGGTGGCTGGCCACGATCATGAAGGCGAACACGGCGCGGCAGTTGCTCGCCGGAACACGTCCCTCGCTCACCGTCATCGGCAGCATTTCGGGCAATGACCGCCCGAGAGCCTTCATCCTGATGGTCACCGGGTTTGCCTTGCAGGGGTTTGTGCTCTCCGCCCTGCTGATCCATATGGTGCCGCTTCTGACGGCCGTTGGCATGGGCGCGAGCGCCGTGATGGTCGGCACGATATTCGGGCCCTCCCAGGTCTTCAGCCGCCTCATCAACATGCTGTTCGGCAAGAGGCTGTCCAACCTTACGCTCGCCGTGATCTCCGCCGGCTTTCTGGTCGCGGGCGTGGCAACGTTGCTGGCGACAGCGCCCAGGATTTCCGGCGGCATCGCCTTCGCCATATTGTTCGGGCTCGGCTCGGGCATCGCGAGCATCGTACAGGGTTCGCTCCCGCTCGCCCTGTTCGGCTCGGACGGCTATGGGGCGTTGCTCGGACGCGTGTCCGCCATTCGGCTCGTCGTATCGGCGCTGGCGCCGTTCGTACTATCGTTCCTGATGGCGAACATGGGCACGTCATCGGCACTCTGGGTGGTGATCGTGCTGGGTATCGGCGCAGTGGCGGCATTCCCCACTTCGCGGGGAGGAGACAAGGCGTAA
PROTEIN sequence
Length: 221
MPIHWWLATIMKANTARQLLAGTRPSLTVIGSISGNDRPRAFILMVTGFALQGFVLSALLIHMVPLLTAVGMGASAVMVGTIFGPSQVFSRLINMLFGKRLSNLTLAVISAGFLVAGVATLLATAPRISGGIAFAILFGLGSGIASIVQGSLPLALFGSDGYGALLGRVSAIRLVVSALAPFVLSFLMANMGTSSALWVVIVLGIGAVAAFPTSRGGDKA*