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SCNpilot_cont_500_bf_scaffold_4823_9

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: 9735..10556

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix, AraC domain protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y2D1_MESOW similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 274.0
  • Bit_score: 411
  • Evalue 8.50e-112
  • rbh
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 274.0
  • Bit_score: 411
  • Evalue 2.70e-112
  • rbh
Helix-turn-helix, AraC domain protein {ECO:0000313|EMBL:AEH88328.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 274.0
  • Bit_score: 411
  • Evalue 1.20e-111

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Taxonomy

Mesorhizobium opportunistum → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
ATGCCCGTCGAGATGCAGCAGCGCAGGGAGCAGGACCAGTCGATCGCCGGTCGCTTCGAAATGCTGCGCCGTCTTCCCGAAAGCCGGCTGGCCGGCATCGTCACCGACATCTGCGGCTATCGCGAGACGGCTGCGGCCCATTTCACCAACATCGAATATGCCTCGCTGACCATACCGCTGGTGATCAGCTTCGCCGAACCTTTCGCCATTGGTTTGGGTAAGGCACCTGGTAGCAATGACCGCTTCGGTAGCTTCGCCGCCGGTCTCTATGCCGGCCCGGTGATGATTGAATCCTTCGGCGCCGCCGCTTGCGTCCAGATCAATTTCACCCCGCTCGGCGCGCGCCGCTTCTTCGGCCTGCCTCTGAGTGAGCTGACGGATCGCATGGTCGATCTCCACAATGCCCTTGGCTGGGAAGGTGTGTCGCTGCGCGAAAGACTGGGCAACGCGCGGGACTGGAGCACGCGCTTCGACCTGGCGGAGGCTTTCGTGGCCGAGCACATGGCGAGCAAGCCTGGCGTTCGCCCCGAGATCGCCTGGGCCTACGGGCACATTCTGGGCTCGGGTGGACGCACGCGCATCGCCACACTGGCCGGCGAGATCGGCTGGAGCCGCAAACACCTCGCCGCAGAGTTCACCGACGCGGTCGGGCTCGGTCCGAAGACACTGTCGCGCATCGTCCGCTTCAACCGGGCACTTCGCTTGTCCGCGACGCAGGATTGGGCCGGCATCGCCGTGGATTGCGGTTACGCCGATCAGGCGCACCTTGCGCGCGAATTCCGCCAGATGGCGGGTCATGCACCGACCGCCCTGGCGATCTGA
PROTEIN sequence
Length: 274
MPVEMQQRREQDQSIAGRFEMLRRLPESRLAGIVTDICGYRETAAAHFTNIEYASLTIPLVISFAEPFAIGLGKAPGSNDRFGSFAAGLYAGPVMIESFGAAACVQINFTPLGARRFFGLPLSELTDRMVDLHNALGWEGVSLRERLGNARDWSTRFDLAEAFVAEHMASKPGVRPEIAWAYGHILGSGGRTRIATLAGEIGWSRKHLAAEFTDAVGLGPKTLSRIVRFNRALRLSATQDWAGIAVDCGYADQAHLAREFRQMAGHAPTALAI*