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SCNpilot_cont_500_bf_scaffold_25633_2

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(592..1857)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 421.0
  • Bit_score: 812
  • Evalue 3.60e-232
Transcription termination factor Rho n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YA54_MESOW similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 421.0
  • Bit_score: 807
  • Evalue 8.20e-231
  • rbh
transcription termination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 421.0
  • Bit_score: 807
  • Evalue 2.60e-231
  • rbh

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Taxonomy

Mesorhizobium sp. ORS3359 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGCAGGAAATGAAACTCGCAGAGTTCAAGAACAAGAAGCCGCCAGAGCTGATCGCTTATGCCGAATCGCTCGAGGTGGAGAACGCCAGCGTCATGCGCAAGCAGGAGCTGATGTTCGCGATCCTGAAGAAGCTTGCCGCCCAGGACGTCGAGATCATCGGCGACGGCGTGGTCGAGGTTCTGCAGGATGGCTTCGGCTTTCTGCGCTCCGCAAACGCCAATTATCTGCCGGGTCCCGATGACATCTACATCTCGCCCTCGCAGATCCGCCGCTTCTCGCTGAAGACCGGCGACACCGTCGAAGGACCGATTCGCAGTCCGAAGGAAGGCGAACGCTATTTCGCGCTCCTCAAGGTCAACACGATCAACTTCGACGACCCGGAGAAGATCCGGCACAAGATCCATTTCGACAATCTGACGCCGCTCTATCCGACCTCGCGGTTGAAGATGGAGACCGAGAACCCGGCCACCAAGGACATCTCGCCGCGCGTCATCGACCTGGTGGCGCCGATCGGCAAGGGCCAGCGCGCTCTGATCAACGCGCAGCCACGCACCGGCAAGACGGTGCTGATGCAGAACATCGCGCATTCCATCACCACCAACCATCCGGAATGCTACCTGATCGTTCTCCTGATCGACGAGCGTCCCGAGGAAGTCACCGACATGCAGCGCTCGGTGAAGGGCGAGGTGATTTCCTCGACCTTCGACGAGCCGGCCGCGCGCCACGTGCAGGTCGCCGAGATGGTGATCGAGAAGGCCAAGCGCCTTGTCGAGCACGGCCGTGACGTCGTCATCCTGCTCGATTCGATCACCCGCCTCGGGCGCGCCTACAACACCGTCGTGCCGTCATCCGGCAAGGTGCTGACCGGCGGTGTCGACGCCAACGCGCTGCAGCGCCCGAAGCGTTTCTTCGGCGCCGCCCGCAACATCGAGGAAGGCGGTTCGCTGACTATCATCGCCACGGCGCTGATCGACACCGGCAGCCGCATGGACGAAGTCATCTTCGAAGAGTTCAAGGGCACCGGTAACTGCGAAATCCAGCTCGACCGCAAGGTGGCCGACAAGCGCATCTATCCGGCGATCGACATCCTCAAGTCCGGCACCCGCAAGGAAGACCTGCTCGTGCCGCGCTCGGATCTGCAGAAGATCTTCGTGCTGCGCCGCATCCTGGCGCCGATGGGAACCACCGACGCGATCGAGTTCCTCATCGACAAGCTCAAGCAGACCAAGACCAATGCCGACTTCTTCGATTCGATGAATACGTGA
PROTEIN sequence
Length: 422
MQEMKLAEFKNKKPPELIAYAESLEVENASVMRKQELMFAILKKLAAQDVEIIGDGVVEVLQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRSPKEGERYFALLKVNTINFDDPEKIRHKIHFDNLTPLYPTSRLKMETENPATKDISPRVIDLVAPIGKGQRALINAQPRTGKTVLMQNIAHSITTNHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAARHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNCEIQLDRKVADKRIYPAIDILKSGTRKEDLLVPRSDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKTNADFFDSMNT*