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SCNpilot_cont_500_bf_scaffold_175_2

Organism: SCNPILOT_CONT_500_P_TM7_47_87

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 11 / 38 MC: 2
Location: 2966..3769

Top 3 Functional Annotations

Value Algorithm Source
Glycosyltransferase, group 2 family protein n=1 Tax=Gardnerella vaginalis JCP8070 RepID=S4HQ91_GARVA similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 264.0
  • Bit_score: 299
  • Evalue 4.60e-78
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EPI59550.1}; TaxID=1261065 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP8070.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 264.0
  • Bit_score: 299
  • Evalue 6.50e-78
gtfF; polysaccharide synthase similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 267.0
  • Bit_score: 261
  • Evalue 2.60e-67

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Taxonomy

Gardnerella vaginalis → Gardnerella → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGTTCAAAATTCGCAAATCAAACCGACTATATATTGCAATGCTTACTGTGTGGGCTGGCCTTATCTCGTTTACAGCCTATCCATTCATTCATGAAATTATTCTTGCCGGAAATAGTAATAGTCCATACGAGCCACTTCTCATTGCGCTGCTTATTTTGAACGCTCTTTTCATTAGCTACTTTTGGCTAAACGGTGTAAAAGATATCACCTACGTTATCTATTACTATCTGTTTCGGGGTCAGATGAATAGGCTTATTCGAACGGCAACAAGCACTCGGCTTAGGCGCAGCCCATCTATCGTCCTCGTGTACTGCACGGCCAATGACTTTAACGAGCATAGTCTCGAGCGCTCTATGAAGCAAAAGTATGATAACTTTAAAACTGTTATCTTGGATGACTCTAGCAAACAAGAGTATCTTGATCGGGTAGACCAATTTGCAAAGCGTCACGACATTGAAGTGATTCGTCGTACAGATCGTGCCGGGTTCAAGGCAGGCAACCTAAATAATTACCTCAAAGGACGTACTGACTACGACTACTTCGTCATTCTTGATAGTGATGAAGTAATTCCAAGTACCTTCATTACATCAGCACTAAAATACTTCAGTCGCTTTAGCGACATTGGCGTCGTACAGGCAAATCACGTGGCAACGCGCAACCGTAATGACTTTATGCATATTTTCTCTAAGGGAGTTAACTCGCACTGGCCAACTTACCAAATGACAAAACACCATCATGGCTTTATGTCGCTTCTTGGGCATGGTGCAATGGTAAGCCGCAAATGTTATGAAGCGGTCGGCTGA
PROTEIN sequence
Length: 268
MFKIRKSNRLYIAMLTVWAGLISFTAYPFIHEIILAGNSNSPYEPLLIALLILNALFISYFWLNGVKDITYVIYYYLFRGQMNRLIRTATSTRLRRSPSIVLVYCTANDFNEHSLERSMKQKYDNFKTVILDDSSKQEYLDRVDQFAKRHDIEVIRRTDRAGFKAGNLNNYLKGRTDYDYFVILDSDEVIPSTFITSALKYFSRFSDIGVVQANHVATRNRNDFMHIFSKGVNSHWPTYQMTKHHHGFMSLLGHGAMVSRKCYEAVG*