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SCNpilot_cont_500_bf_scaffold_567_11

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 7724..8854

Top 3 Functional Annotations

Value Algorithm Source
dehydratase n=1 Tax=Frankia sp. BMG5.12 RepID=UPI000366987F similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 382.0
  • Bit_score: 623
  • Evalue 2.00e-175
  • rbh
L-carnitine dehydratase/bile acid-inducible protein F; K14470 mesaconyl-CoA C1-C4 CoA transferase similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 387.0
  • Bit_score: 614
  • Evalue 2.90e-173
  • rbh
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ABW16162.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 382.0
  • Bit_score: 614
  • Evalue 1.30e-172

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1131
ATGACGCTCGCGCAGCTCGGCGCCGACGTGATCCGGATCGACCCGGTCGGCGGCGGCAGCGACCACCTGCGCTGGCCGGTCGCGGCCGACGGCGAGAGCTTCTACTGGGCCTCGCTCAACAAGGGCAAGCGCTCGGTGGCCGTCGACATGCGCAGCGACGAGGGCAAGGAGCTGGTGACGGCCTTGATCACCGCGCCCGGCCCGGACCGCGGCGTGCTGATCGACAACGTCGTCGGGCGCCGCTGGATGGCCCACGACACCCTCGCCGCGCGGCGGGCGGACCTGATCCACGTGCGCGTCCAGGGCTACCCCGACGGGCGGCCCGCGGTGGACTACACCGTCAACGCCGAGGTCGGGCTGCCCGGCATCACGGGCACCGAGGAGGGCGGGGCGCCGGTCAACCACGTCCTGCCGGCGTGGGACCTCGTCACCGGGCTCAGCGTCTCCACGGCGGTCCTGGCCGCGCTGCGCGACCGGGACCGGAGCGGCGGCGGCGCGTTCGTCGAGATCGCGCTGTCGGACATCGCGCTGGCCGGGGTGGCCAACCTCGGCTGGCTGTCGGAGGCCGCCGAGCGCGGCGTCGAGCGGCCCCGGCACGGCAACCACGTCTACGGCAGCTTCGGCGTCGACTTCGCCTGCCGCGACGGCCACCGCGTCATGGTCGTGGCGCTCACCGAGGGCCAGTGGGCCGCGCTCTGCTCGGTGACCGGCACCGGCAAGGTGTTCGAGGCGCTGGAGGCGGCCATGGACGCCGACCTCACCCGCGAGGCCGACCGCTACCGCCTCCGCGAGACGATCGCCGCGATCCTGCGGCCGTGGTTCGCCGCCCGCGACCGGGCGCAGGTCTCCACCGAGCTCGACGGCGCGCGCGTGCTGTGGGGTCGCTACCAGGGCATGACCGACGTGGTGGCCGCGCACCGCGACGGCGCCCACCCGGTCCTGGCCGACCTGACGCTGCCGGGTTCGGCGGCGGCGATCACGGCCCGTTCGCCGCTGCGCTGGAACGGCGAGCACGGGGACGCCGGGGCGGCGCCGTCGCTGGGGCGGGACACCGGGGCGGTGCTGGCCGAGGTACTGGGACTGTCCGACGCGGAGATCGGCCGGCTGGCCGGGGCGGGAGTGGTGGGATGA
PROTEIN sequence
Length: 377
MTLAQLGADVIRIDPVGGGSDHLRWPVAADGESFYWASLNKGKRSVAVDMRSDEGKELVTALITAPGPDRGVLIDNVVGRRWMAHDTLAARRADLIHVRVQGYPDGRPAVDYTVNAEVGLPGITGTEEGGAPVNHVLPAWDLVTGLSVSTAVLAALRDRDRSGGGAFVEIALSDIALAGVANLGWLSEAAERGVERPRHGNHVYGSFGVDFACRDGHRVMVVALTEGQWAALCSVTGTGKVFEALEAAMDADLTREADRYRLRETIAAILRPWFAARDRAQVSTELDGARVLWGRYQGMTDVVAAHRDGAHPVLADLTLPGSAAAITARSPLRWNGEHGDAGAAPSLGRDTGAVLAEVLGLSDAEIGRLAGAGVVG*