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SCNpilot_cont_500_bf_scaffold_567_20

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(16095..16970)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262854C similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 290.0
  • Bit_score: 445
  • Evalue 5.70e-122
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:AIJ22813.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 290.0
  • Bit_score: 443
  • Evalue 1.80e-121
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 289.0
  • Bit_score: 401
  • Evalue 3.00e-109
  • rbh

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGGAGCGCCGCCAGCTGGAGTACTTCGTGGCCGTCGTGGAGCGCGGCGGCTTCACCGCGGCCGCCCGTGCGCTGCACGTGGCGCAGCCGTCGCTCTCGCGCTCCGTCGCCAACCTGGAGCGCGAGCTGGGGGTCGAGCTGTTCCACCGGGTGGGACGGTCGGCGCTGCTCAGCGCCGCGGGCGAGGCCCTGGCCGGGCACGCACGGCTGGTGCTGCGCGACTTCGACGCCCTGCGCTCCGCGGCCCACGCGATCGGCGAGGGCGCGGTCGGGCGGGTGGAGGTGGCGGCGACGTCGTCGTCGGGACTGGAGCCGGTCACGCGCGTCGTCGCCGAGCTGCGCGAGCGACACCCGGGCGTCACCGTCAGCACGACGTCGGCGCTGTCCGCGGCCGAGGTCGTCGCGATGGTGGCCCAGGGCCGGTGCGAGGCGGGGGTGTGCGGCAGTGCCGAGCGCCCGGCGGCGCCGGGACTGGTGGCCCACCACCTGCGCGACGAGGAACTGCTGCTCGTCGTCCCGCCCGGTGCGCTCGGCGGGAAGGGCCGCACCGTGCGCCGCGACGAGCTGCGGGGCATGCGGTTCGTGGTGCCCGCCCGGACCACGGCCGTGCGGGCGCTGTTCGACCGGCTCGCCGGCACGGTCGGCGACATGACGGTGGTGGCCGAGGTGGGCGACCGGAGCATGGTGCTGCCGATGGTGCTGCGCGGCATCGGGGCCGGCCTGATGCCCGACGGCTGGGCCGACCTGGCCGGGCGGGCCGGCGCCGACGTCCACGGCTTCGACCCGCCCGAGCTGCTCCCCCAGTGGCTGGTCCACCGCGGCGGGAGGCTCACCGAGGCCGCACGGGCCTTCATCGACACGACGCTGGGCCACTGA
PROTEIN sequence
Length: 292
MERRQLEYFVAVVERGGFTAAARALHVAQPSLSRSVANLERELGVELFHRVGRSALLSAAGEALAGHARLVLRDFDALRSAAHAIGEGAVGRVEVAATSSSGLEPVTRVVAELRERHPGVTVSTTSALSAAEVVAMVAQGRCEAGVCGSAERPAAPGLVAHHLRDEELLLVVPPGALGGKGRTVRRDELRGMRFVVPARTTAVRALFDRLAGTVGDMTVVAEVGDRSMVLPMVLRGIGAGLMPDGWADLAGRAGADVHGFDPPELLPQWLVHRGGRLTEAARAFIDTTLGH*