ggKbase home page

SCNpilot_cont_500_bf_scaffold_746_47

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 43655..44635

Top 3 Functional Annotations

Value Algorithm Source
ribosomal RNA small subunit methyltransferase H; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 326.0
  • Bit_score: 543
  • Evalue 4.10e-152
  • rbh
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 326.0
  • Bit_score: 543
  • Evalue 1.80e-151
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL70_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 326.0
  • Bit_score: 543
  • Evalue 1.30e-151
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 981
GTGGGGCAGCACCCCGAAGGGAACGGGCCGGCTGGGGCCAGGCACGTTCCCGTTTCCCTGGCTCGCGTCGCCGAGCTGCTCGCGCCCGCGCTGGCGGACCGGCCGGCCGTGCTGGTCGACGCCACACTCGGCCTCGGCGGCCACGCCGCGGCCCTGCTCGCCGCCCACCCGCAGCTCACCCTGGTCGGCCTCGACCGCGATCCCGACGCGCTGGCCATGGCCGGGCGCAGGCTGGCGGCGTTCTCCGACCGGCTGCACCTGGTCCACACGGTCTACGACCGCATCGCCGACGTCCTCGCGGAGCTGGGGCTGCCGCGCGTCGACGGCGTGCTGTTCGACCTGGGCGTCTCGTCGCTGCAGCTCGACGCGGACGAGCGCGGCTTCTCCTACTCGCGCGACGCGGACCTCGACATGCGCATGGACCCCACCACCGGGCCCACCGCCGCCGAGGTCCTCAACACCTACCCGGTGCCGGCGCTGGCCCGGATCCTGCGCGAGTACGGCGAGGAGCGCTTCGCCGGTCGCATCGCCTCCGCGGTCGGCCGGCGGCGCGAGCAGACGCCGTTCCGCCGCAGCGGCGAGCTGGTGGAGCTGCTCTACGAGGCCGTGCCCGCGGCGTCGCGGCGCACCGGCGGCCACCCGGCCAAGCGGACGTTCCAGGCGCTGCGGATCGAGGTCAACGGCGAGCTCGACGCGCTGGAGACCGCGATGCCCGCGGCCGTGGACGCGCTCGCGCTGGGCGGGCGGATCGTCGTGCTCGCCTACCAGTCGCTCGAGGACAAGATCGTCAAGCGGGAGCTGGCGGCCCGGTCCACGTCGACGTCACCGATGGACCTGCCGGTGGAGCTGCCGGGTCACGGCCCGGAGCTGCGGCTGCTGGTGCGGGGCTCGGAGCAGGCGGGCGAGGACGAGATCGCCGACAACCCGCGGGCCGCCTCGGTCCGCCTGCGGGCGGCGGAGCGCATCCGGGAAGCGTCATGA
PROTEIN sequence
Length: 327
VGQHPEGNGPAGARHVPVSLARVAELLAPALADRPAVLVDATLGLGGHAAALLAAHPQLTLVGLDRDPDALAMAGRRLAAFSDRLHLVHTVYDRIADVLAELGLPRVDGVLFDLGVSSLQLDADERGFSYSRDADLDMRMDPTTGPTAAEVLNTYPVPALARILREYGEERFAGRIASAVGRRREQTPFRRSGELVELLYEAVPAASRRTGGHPAKRTFQALRIEVNGELDALETAMPAAVDALALGGRIVVLAYQSLEDKIVKRELAARSTSTSPMDLPVELPGHGPELRLLVRGSEQAGEDEIADNPRAASVRLRAAERIREAS*