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SCNpilot_cont_500_bf_scaffold_746_69

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 71098..72027

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 310.0
  • Bit_score: 535
  • Evalue 1.10e-149
  • rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 310.0
  • Bit_score: 535
  • Evalue 4.80e-149
Pseudouridine synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMS7_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 310.0
  • Bit_score: 535
  • Evalue 3.40e-149
  • rbh

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGAGTGACACCCGCCAGCTCCCCGTCCCCGACGGGCTCGACGGCATGCGCGTCGACGCCGGGCTGTCCCGTCTCCTCGGCCTCTCCCGCACCGTCGTCGCCGCGCTCGCCGAGGACGGCCACGTCGCGGTCGACGGGCGCGCCGCCGGCAAGTCCGACCGCCTGACCGCCGGCTCGTGGCTCGAGATCGAGCTGCCCGAGCCCGAGGCACCCGCGCCCATCAGCGGGCCCGTCGAGGTCGTGGCCGGGCTGGGCATCCTCTACGCCGACGACGACATCGTCGTGGTCGACAAGCCCGTCGGCGTGGCCGCGCACCCCAGCCCCGGCTGGACCGGCCCCACCGTCGTCGGCGGGCTGGCCGCCCTGGGCTACCGCGTCTCGACGTCCGGCGCGGCCGAGCGCCAGGGCATCGTGCACCGCCTCGACGTCGGCACCACCGGCGTCATGGCCGTCGCCACCTCCGAGCACGCGTACACCGAGCTCAAGCGCGCGTTCAAGGAGCGCACGGTGGAGAAGCGCTACCACGCGGTCTGCCAGGGGCACCCCGATCCCTCCAGCGGCACGATCGACGCCCCGATCGACCGCCACCCCAAGCACGACTACCGCTTCGCCGTGGTGGCCGACGGCAAGCCCAGCGTCACCCACTACGACACGGTGGAGGCGTTCCGGGCCGCGTCGCTGCTCGACATCCACCTGGAGACCGGCCGCACCCACCAGATCCGCGTGCACCTCTCCGCGCTGCGCCACCCCTGCGTCGGCGACCTGGCCTACGGCGCCGACCCGACGCTGGCCAAGCGGCTGCACCTGGACCGGCAGTGGCTGCACGCCCGCTCGCTCGGTTTCGCCCACCCCGCCGACGGTCGCTGGGTGGAGTTCACCAGTCCCTACCCCCCTGACCTGGAGCGCGCGCTCGAGCTCCTGCGCGACTGA
PROTEIN sequence
Length: 310
MSDTRQLPVPDGLDGMRVDAGLSRLLGLSRTVVAALAEDGHVAVDGRAAGKSDRLTAGSWLEIELPEPEAPAPISGPVEVVAGLGILYADDDIVVVDKPVGVAAHPSPGWTGPTVVGGLAALGYRVSTSGAAERQGIVHRLDVGTTGVMAVATSEHAYTELKRAFKERTVEKRYHAVCQGHPDPSSGTIDAPIDRHPKHDYRFAVVADGKPSVTHYDTVEAFRAASLLDIHLETGRTHQIRVHLSALRHPCVGDLAYGADPTLAKRLHLDRQWLHARSLGFAHPADGRWVEFTSPYPPDLERALELLRD*