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SCNpilot_cont_500_bf_scaffold_828_32

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(36732..37013)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 91.0
  • Bit_score: 177
  • Evalue 2.20e-42
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivor similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 91.0
  • Bit_score: 177
  • Evalue 1.00e-41
DNA-directed RNA polymerase subunit omega n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZG1_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 91.0
  • Bit_score: 177
  • Evalue 7.10e-42

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 282
GTGAGCATGCCGCTGACCGGCGCCACCGCCGGCGCACTTCCCGAGGGCATCACCAACCCGCCCATCGACGACCTCCTCGGTCAGGTGAGCTCCAAGTACGCGCTGGTCATCTACGCGGCCAAGCGCGCCCGCCAGATCAACGACTACTACTCCCAGCTCGGTGAGGGCCTGCTCGAGTACGTCGGCCCGCTCGTCGAGCCGGGCCCGCGCGAGAAGCCCCTGTCCATCGCCATGCGCGAGATCCAGGCCGGCCTGCTGGAGCACACCGAGGGCGCGGAGTAG
PROTEIN sequence
Length: 94
VSMPLTGATAGALPEGITNPPIDDLLGQVSSKYALVIYAAKRARQINDYYSQLGEGLLEYVGPLVEPGPREKPLSIAMREIQAGLLEHTEGAE*