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SCNpilot_cont_500_bf_scaffold_1690_4

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 3849..4511

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WJT7_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 220.0
  • Bit_score: 313
  • Evalue 2.00e-82
  • rbh
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 220.0
  • Bit_score: 313
  • Evalue 6.10e-83
  • rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACU36312.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 220.0
  • Bit_score: 313
  • Evalue 2.70e-82

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Taxonomy

Actinosynnema mirum → Actinosynnema → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGATCGTCACCCCGGTCCGTCAGCCGCCGCTCGGCGAGCAGCTGCTCGACCAGCTGCGGGCACTGATCGTGCGGGGCGAGCTCGCCGAGGGCACGCACCTGGTCGAGGGCTGGATGGCCGAGCGGTTCGGCGTCAGCCGCGGCCCGGTCCGGGATGCGTTGAAGCAGCTGGAGATCGAGGGCCTGGTCGAGACGCGCAAGCGCGGCGTCTCGGTCCGGGGGCTCACCGACACCGACATCGTCGAGCTCTACGCCGTGCGCGGCGCGCTCGAGACGTTGGCGGTGCGCGAGGTGATCGCGCGGGCGGCGGAGGCCGACTGGGCGCCGCTCGACGACGCCGTCGCCGTGATGCGCGAGGCGGCCGCCGCGGCCGACCCGGTCCGGTTCGGCGCCGCCGACCTCGACTTCCACAGCGGCTTCTACGCGATCGCGGCCAACCGCAGGCTCGCGTCCACGTGGGCGCTGCACCGGCCGCTGTTCGCCGCGATGCTGGCGGTGACCAACACCGACCGCGACCTCGCCCCCGTCGCCCAGGACCACGCCGACCTGTCGGCGGTGGTCCGCTCCGGGGAGGTGGAGCCGGCGCTGGCCGCGCTGGCCGTGCACCTCGACGGCTCCTGCTCGCGCATGCGGGCCTTCATGGCCACCCGCTCGGCCGCCTGA
PROTEIN sequence
Length: 221
MIVTPVRQPPLGEQLLDQLRALIVRGELAEGTHLVEGWMAERFGVSRGPVRDALKQLEIEGLVETRKRGVSVRGLTDTDIVELYAVRGALETLAVREVIARAAEADWAPLDDAVAVMREAAAAADPVRFGAADLDFHSGFYAIAANRRLASTWALHRPLFAAMLAVTNTDRDLAPVAQDHADLSAVVRSGEVEPALAALAVHLDGSCSRMRAFMATRSAA*