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SCNpilot_cont_500_bf_scaffold_3067_3

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 958..1350

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.4
  • Coverage: 130.0
  • Bit_score: 104
  • Evalue 8.80e-20
Ribonuclease VapC n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FQ05_ISOV2 similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 130.0
  • Bit_score: 104
  • Evalue 6.30e-20
PilT protein domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 130.0
  • Bit_score: 104
  • Evalue 2.00e-20

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Taxonomy

Isoptericola variabilis → Isoptericola → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 393
TTGATCTATCTGGACACGTCCGCGTTCCTCAAGACAGTGCTGGACGAGGCAGGGTCGGCGGCTCTGCAGTTGTACCTCGACAGTCATCCCGACGGGGGGTTGGTGTCGAGCAGCCTGCTCGTGGTGGAGGCACGCCGTGGTGTGCTGCGCCATCAACCTGCCCGTCTGCCCCGCACCGACATCATCCTGGGCCAGATCGAGCTGCTCGCCATCTCGGACGCCGTGATCGAATCCGCCGGCCGCCTGCCCGACCCGATGCTCCGCTCCCTCGACGCGATCCATCTCGCCACAGCGCTCCTGATCCGGGATGACGTGGAGGCGCTCCTGACCTACGACACGCGCCTGCGCGAGGCGGCGGAGGCCCACGGCCTGGCGACGGCCGCTCCGGCCTGA
PROTEIN sequence
Length: 131
LIYLDTSAFLKTVLDEAGSAALQLYLDSHPDGGLVSSSLLVVEARRGVLRHQPARLPRTDIILGQIELLAISDAVIESAGRLPDPMLRSLDAIHLATALLIRDDVEALLTYDTRLREAAEAHGLATAAPA*