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SCNpilot_cont_500_bf_scaffold_6294_3

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(2163..4052)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase LigD, polymerase domain-containing protein; K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 656.0
  • Bit_score: 901
  • Evalue 1.50e-259
  • rbh
DNA polymerase LigD, polymerase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVX7_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 656.0
  • Bit_score: 901
  • Evalue 4.80e-259
  • rbh
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:AEA25462.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 656.0
  • Bit_score: 901
  • Evalue 6.70e-259

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1890
ATGCTCGCACTGGCCCGGGGTGCAACGCAAGAGGGTCTTAAGCTGTGCTCCATGGCGCTCGAGGAGTACCGCCGCAAACGCGACGCGCGGCGCACGCCCGAGCCCGTGCCGGAGGGTGACCCGGCACCCGGCACCGACAACCGGTTCGTCATCCAGGAGCACCACGCCCGCCGCCTGCACTGGGACGTCCGCCTCGAGCGCGACGGCGTACTGGCCTCGTGGGCCGTGCCCAAGGGGCTCCCGCCCGAGCCGGGCGTCGTGCGGCTGGCCGTGCGCACCGAGGACCATCCCATCGAGTACCTGGAGTTCTCCGGGGAGATCCCGGCCGGTGAGTACGGCGGCGGCTCGATGACGATCTGGGACGCCGGCACCTACGAGACCGAGAAGTGGAACCGCCGCGAGGTGATCGTGCGGATGGCCGGGCGGCGGGCGCAGGGCCGCTACGTGTTCATCCGCACCGAGCGGGAAGGGGAGAAGGACAGCTGGCTGCTGCAGCGCTCCGACCCGGCCCCCGACCGGGAACCCCTCCCCCGCGACGCCCGGCCCACCGTCGCCACCCCGGGCTCCCTCCCGGTGGGCCACTGGCTGCAGGTCGGGTTCGGCGGGCGGCGCGTGATCGTCCGGGTCGACGGCGGCCGCGCCCGCTACACCGACGCCGACGGCGGGGAGGTCGACGGGCCGGCGGGGCTCGGGCCGGCCCTGGGTGCCACCCCGGTGCTCCTCGACGCGGAGCTCCTCCCGACCGGCGAGCTGTGGATCGGCGACGTCCTGCACCTCGACGGCCGCGACACCGCTCCCCTGCCGTTCCGCGACCGCCGCGCGCTGCTGGAGGGCCTGCCGCTGGCCGGGCCGCACTGGCGCCTCGCCCCGGTCTTCCCCGACGGCGACGACGCGGTGATCGCGGCCGTGCGCGAGCAGGGGCTGCCGTCGGTGGTGGCCAAGGACCCGGACGCGCCCTACGACAGCGCGTGGGTGGAGGTGCTGGGCCGCACGAGGCCGCCGCCTGCGGCCACCCGCGCCAAGCTCACCAATCCGGACAAGGTGCTCTACCCGCTGACCGGCACCACCAAGTCCGACGTGCTGGCGCACTACCTGGCCGTCGCCGAGGTGATGCTGCCGCACCTCGCCGACCGCCCGGTCACCATGGTCCGCTGGCCCGACGGCGTCGAGCGCTCGTCGTTCTTCGAGAAGGACGTGTCGCGGCACGCGCCGTCGTGGATCCGCACCGCGCGGGTCGACACGCCCGGTGGGCGTTCGGAGAGCGCCGACTTCCCGCTCATCGACGACGTCGACGGGCTGGCGTGGGCGGCCAACCTCGCGGCCCTGGAGCTGCACGTGCCGCAGTGGCGCATCGGCCCGCGCGGCGGCCACCACCCGCCCGACCTGGTGGTGTTCGACCTCGACCCGGGCGAGGGCACCACCGTCGTCGACTGCGCGCGGGTGGCCGAGCGGATCGCCGACCACCTCGCCGCGGACGGCCTCGTCGCGTACCCGCGCACCAGCGGCGGCAAGGGCATGCAGCTCTACCTGCCCGTGACGGTCACGCGGCCGGAGCAGACCTCGGAGTTCGCGAAGGCCCTGGCGGAGGAGATGGCGGCCGAGACGCCGCGCCAGGTGATCGCCGTGATGAACAAGGCGCGCCGGCGGGGCCGGGTGTTCGTCGACTGGAGCCAGAACAACCCGCACAAGACCACCATCGCCAGCTACTCGCTGCGCGGCCGCGCCCGGCCCACCGTCGCCACGCCCGTGACCTGGGACGAGGTGCGCGCGGCGCGGAAGCCCGAGGACCTGACGTTCACCCTCGACGACCTGCCCGCACGGCTCGCGGAGCACGGCGACCTGCTCTCCCCGCTGTTCACCGACACGCAACGCCTTCCGCGTCGCGGTTGA
PROTEIN sequence
Length: 630
MLALARGATQEGLKLCSMALEEYRRKRDARRTPEPVPEGDPAPGTDNRFVIQEHHARRLHWDVRLERDGVLASWAVPKGLPPEPGVVRLAVRTEDHPIEYLEFSGEIPAGEYGGGSMTIWDAGTYETEKWNRREVIVRMAGRRAQGRYVFIRTEREGEKDSWLLQRSDPAPDREPLPRDARPTVATPGSLPVGHWLQVGFGGRRVIVRVDGGRARYTDADGGEVDGPAGLGPALGATPVLLDAELLPTGELWIGDVLHLDGRDTAPLPFRDRRALLEGLPLAGPHWRLAPVFPDGDDAVIAAVREQGLPSVVAKDPDAPYDSAWVEVLGRTRPPPAATRAKLTNPDKVLYPLTGTTKSDVLAHYLAVAEVMLPHLADRPVTMVRWPDGVERSSFFEKDVSRHAPSWIRTARVDTPGGRSESADFPLIDDVDGLAWAANLAALELHVPQWRIGPRGGHHPPDLVVFDLDPGEGTTVVDCARVAERIADHLAADGLVAYPRTSGGKGMQLYLPVTVTRPEQTSEFAKALAEEMAAETPRQVIAVMNKARRRGRVFVDWSQNNPHKTTIASYSLRGRARPTVATPVTWDEVRAARKPEDLTFTLDDLPARLAEHGDLLSPLFTDTQRLPRRG*