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SCNpilot_cont_500_bf_scaffold_20279_3

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(1166..1807)

Top 3 Functional Annotations

Value Algorithm Source
Two component system DNA binding response regulator n=1 Tax=Streptomyces sp. C RepID=D9VPD4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 206.0
  • Bit_score: 325
  • Evalue 4.80e-86
  • rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJY34546.1}; TaxID=68223 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces katrae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 206.0
  • Bit_score: 326
  • Evalue 3.00e-86
Hemoglobin-dependent two component system response regulator HrrA similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 207.0
  • Bit_score: 323
  • Evalue 4.40e-86
  • rbh

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Taxonomy

Streptomyces katrae → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 642
GTGAACCCCACCATCCGGCTGCTGCTGGCCGACGACCACCCCGTGGTGCGACGCGGCCTGCGCGCGGTGCTCGACACCGAACCGGGCTTCACCGTGGTGGCCGAGGCGGCCACCGCAGAGCAGGCCGTGGCGCTGGCCGCCGTCGAGGCCGTCGACGTGGTGCTCATGGACCTGCAGTTCGGGTCCGGAATGCGCGGCGCAGAGGCCACCGCCGCGATCACCGCGCGTCCCGGAGCGCCCCGGGTGCTCATCCTGACCACCTACGACACCGACGCCGACATCCTCGCCGCGATCGAGGCCGGCGCCACCGGCTACCTGCTCAAGGACGCCCCGCCCGACGAGCTCGCCGCCGCCGTGCGCACCGCGGCGGCGGGCAACTCCGCGCTCGCCCCCGCGGTGGCCCACCGGCTGATGACCCGCATGCGCTGCCCCGGTACGGCCCTGAGCCGCCGCGAGACCGAGGTTCTCCAGCACGTCGCCGACGGCCTCTCCAACCAGCAGATCAGCAAGCGACTGCACCTGAGCCAGGCCACCGTCAAATCCCACCTCGTGCACGTCTACGCCAAACTCGGCGTCGAGTCCCGCACCGCCGCCGTCGCAGCCGCGACGGAACGGGGCGTCATCCGCCGCTCCGGCGCGTGA
PROTEIN sequence
Length: 214
VNPTIRLLLADDHPVVRRGLRAVLDTEPGFTVVAEAATAEQAVALAAVEAVDVVLMDLQFGSGMRGAEATAAITARPGAPRVLILTTYDTDADILAAIEAGATGYLLKDAPPDELAAAVRTAAAGNSALAPAVAHRLMTRMRCPGTALSRRETEVLQHVADGLSNQQISKRLHLSQATVKSHLVHVYAKLGVESRTAAVAAATERGVIRRSGA*