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SCNpilot_cont_500_bf_scaffold_1635_28

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_12_partial

partial RP 22 / 55 MC: 1 BSCG 23 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 27464..28987

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPE5_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 507.0
  • Bit_score: 977
  • Evalue 4.20e-282
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 507.0
  • Bit_score: 977
  • Evalue 1.30e-282
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:ABE61902.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 507.0
  • Bit_score: 977
  • Evalue 5.90e-282

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1524
ATGCGTCCTCAGTTTCCCGCACATCAATCTCCGTGGTTGCCGGCCGACCTCGGCTTCTATGACGTGAGACTGAAGGAGACTCGCCGGCAACAGGCCGAACTGGCACGCCGCTACGGCATTCACGGCTTCTGCTATTACGTCTACTGGTTCCAGGGCCGCAGGCTTCTCGAAAGGCCGCTGGAGCTGCTTCTTGAGGACGGAGAACCGGACATCCCGTTCTGCATTTGCTGGGCGAATGAGAACTGGTCGCGTCGTTGGGACGGCTCGGACGCGGAGGTTCTTCTCGGACAAAATCATTCGCTGGATGACGATGTTCGCTTTATCGATGATATGGCAGAACTTCTGCTCGATGAACGTTACATCGCGGTAGACGGACGCAAGATCATTCTCATCTATCGGCCGTCGCTCTTGCCGGACAGGCAACGTCTGTTCGAGACATGGCGCGCGAGAGCAAAGGAATTGGGGATCGGAGAAATTCTGATCTGCAACGCCATGACCTTCGGAGAGTTTGATCCGCGCGATCTTAACTGTGATGCAGCCGTGGAGTTTCCTCCGCATACCGTCTTGACGATGGAGCAGTCGCTTTCGGAGATTGGAGCGCCGGCGAGCTTTACGGGAAAGGTTTACGACTATGTCGATGCCGTTCGCTCGTCATTGGGAAAGACATACGATTTCCCCTATTTTCCGGCCGTCATGCCACGCTGGGACAATACGCCCCGCAAGGGTTCGCGCGCGCACATCTTCAACAGGTCGAGTCCGGAAGCATTCGAAGTCTGGCTGCGGGATGCCGCCGGTCGGGCGAGAAGGGGGCAATTTGCCGAGCCGATCGTTTTCATCAACTCCTGGAACGAATGGGCCGAGGGGGCTCACCTTGAGCCGGACTCGCGTTACGGGCGAGCATTTCTGGAGGCGGTAAGAAGGGTTTCATCCTCCGAACCGATTTCGACCCAGGTGCGCTCGAATCCGGACTTGCTGGATTGCTTGAGCCGGCAGGAGCTTGAGCAAGCAGTGAAGGAAGCGGCTACCCACGTTCAACTGCTCGCTACCCTTCATCGATCGGAGATGGTCTATTCGGGCCTGCAACACGCGCGGAACGGGATTCCGCTGGAAGCCCGAGGTGCGTCGGAGAATCCGCCGGAATCATTGCTCGTCATCGAGAACATCAATTCCCAGACGAGCGAGCGGGTGGTGGTCGATCCGCGATCGACGGTCCTCGTGCGGGGATGGGTATGTGCAGGCGGGACATTCGAGGCGACGAAACACAGGATAGCGTTCCTGCTCCTGCTCTCCGTGACTGCTGAAAAGCAGGATCACAACGGCTATTGCCTGGTCGTGGACTGGCACGAACGCTTCGACGTCAAGAATTACATGCAGGCGAAAAGCAGGGATTGCTATTTCGGCTTCCAGCTTTCTTTTTTCGTGCGCGATATACCAGACGGAGAATACCAGATCGCGATTCTGGAGGTAGGCGAGGGGAGCCGCGCGCTCGTCAGGTCCAATCATTCGATCATCGTCCGACGTTAA
PROTEIN sequence
Length: 508
MRPQFPAHQSPWLPADLGFYDVRLKETRRQQAELARRYGIHGFCYYVYWFQGRRLLERPLELLLEDGEPDIPFCICWANENWSRRWDGSDAEVLLGQNHSLDDDVRFIDDMAELLLDERYIAVDGRKIILIYRPSLLPDRQRLFETWRARAKELGIGEILICNAMTFGEFDPRDLNCDAAVEFPPHTVLTMEQSLSEIGAPASFTGKVYDYVDAVRSSLGKTYDFPYFPAVMPRWDNTPRKGSRAHIFNRSSPEAFEVWLRDAAGRARRGQFAEPIVFINSWNEWAEGAHLEPDSRYGRAFLEAVRRVSSSEPISTQVRSNPDLLDCLSRQELEQAVKEAATHVQLLATLHRSEMVYSGLQHARNGIPLEARGASENPPESLLVIENINSQTSERVVVDPRSTVLVRGWVCAGGTFEATKHRIAFLLLLSVTAEKQDHNGYCLVVDWHERFDVKNYMQAKSRDCYFGFQLSFFVRDIPDGEYQIAILEVGEGSRALVRSNHSIIVRR*