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SCNpilot_cont_500_bf_scaffold_3666_5

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_12_partial

partial RP 22 / 55 MC: 1 BSCG 23 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 6455..7789

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion membrane fusion protein, HlyD n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IXW2_RHOP2 similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 444.0
  • Bit_score: 581
  • Evalue 5.90e-163
Type I secretion membrane fusion protein, HlyD; K12542 membrane fusion protein LapC similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 444.0
  • Bit_score: 581
  • Evalue 1.90e-163
Type I secretion membrane fusion protein, HlyD {ECO:0000313|EMBL:ABD06948.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 444.0
  • Bit_score: 581
  • Evalue 8.30e-163

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1335
ATGCGGCAGTCTGATTTTGCATTCGCCAATGATGTGCGCGCAGCGGTCGAACTCCGCACGCCGCGAACATCGAGCATGATCCTGCTCTCGACGCTGGCCCTGATCGTGGTCGCGTTGATATGGGCCAATTTTGCGATACTGGATGAAGTGAAGCGCGGCAACGGCCGCGTGATCCCCACTCAACAGATGCAGGTGTTGCAGTCGCTCGAAGGCGGCATCGTCGGCGCCATTCTGGTGAAGGAAGGCGATATCGTCTCCAAGGGCCAGACCGTGATGCGGATCGAGGACATCAAATTCGCTTCCGAGCTCGGCGAGATTCGCGAACGGCGATATGCCACCGCCGCGCGCGTGGCTCGGCTGGAAGCGGAGTCGGCCGGCAAGAGCACGCTGGAATTTCCGCCGGAGCTCGAGAAGGCGGCGCCTGCCGCGGTGGCCGCGGAGCAAAGCCTGTTCCAGGCCCGCGCCCGCAAGCTCGCGCAGGACATCGATGTGATCGTCCAGCAGTCAACGCAGCGCCGCAGCGAGCTCGAAGAGTATAAAGCGACATCGGTCAAACTCACCAACACCCTGAAGCTTTTGCAACGCGAGCTCGACCTCACGCAGAAGCTTTATAACCAGAAAGTCGTTCCCGAGATCGAACTGCTGCGCATCCAGCGGCAGGCCACCGACATGCAGGGGCAACTGGACGTCGCAAAGGCGTCAATGGCCAAGGCGGAGGCCGGCATCCAGGAAGCTGAATCGCGATTGCAGAACGCGAAAGCCACGTTGCGGGCGCAGGCTGACGAAGACCTTGCAAAATCCCGCGGCGATCTCGCGGTGCTCGAGGAAAACATCAAGTCGGCGAAGGACCGCGTCTTCCGCGCCGAGATGAAATCTCCGGTGCACGGCATCGTCAACAAGATCAACGTGACGACCATCGGGGCGGTGATTCAGCCCGGCGGCAATCTGATGGACATCGTTCCGCTGGACGACAATCTGCTGGTCGAGGGTCAGATTCGGCCGCAGGACATCGCCTTCATCAGAGCCGGCCAGGATGCGATCGTGAAGATCTCGGCCTACGACTCGTCGGTCTACGGTTCGCTGAACGGAAAAGTGGAACGCGTCAGCGCCGATGCGATCACCGACGACAAGCCCAGCCGCAACGGCGAGAAGGAAACCTTCTATCGGGTCATCGTCCGCACCGACAAAAACCATCTCGGCACCAGCAAGACTCCGCTGCCGATCATTCCGGGAATGGTTGCGACGGTCGAGGTGATGACGGGACACAAATCGGTTCTCGATTATCTGGTCCGGCCCGCCCGGCTGCTTCGCGACGAAGCGCTGCGCGAGCGTTGA
PROTEIN sequence
Length: 445
MRQSDFAFANDVRAAVELRTPRTSSMILLSTLALIVVALIWANFAILDEVKRGNGRVIPTQQMQVLQSLEGGIVGAILVKEGDIVSKGQTVMRIEDIKFASELGEIRERRYATAARVARLEAESAGKSTLEFPPELEKAAPAAVAAEQSLFQARARKLAQDIDVIVQQSTQRRSELEEYKATSVKLTNTLKLLQRELDLTQKLYNQKVVPEIELLRIQRQATDMQGQLDVAKASMAKAEAGIQEAESRLQNAKATLRAQADEDLAKSRGDLAVLEENIKSAKDRVFRAEMKSPVHGIVNKINVTTIGAVIQPGGNLMDIVPLDDNLLVEGQIRPQDIAFIRAGQDAIVKISAYDSSVYGSLNGKVERVSADAITDDKPSRNGEKETFYRVIVRTDKNHLGTSKTPLPIIPGMVATVEVMTGHKSVLDYLVRPARLLRDEALRER*