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SCNpilot_cont_500_bf_scaffold_4638_21

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_12_partial

partial RP 22 / 55 MC: 1 BSCG 23 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(16288..16764)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=GREA_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 158.0
  • Bit_score: 304
  • Evalue 6.50e-80
  • rbh
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 158.0
  • Bit_score: 304
  • Evalue 2.10e-80
  • rbh
Transcription elongation factor GreA {ECO:0000255|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000255|HAMAP-Rule:MF_00105}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 158.0
  • Bit_score: 304
  • Evalue 9.20e-80

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Taxonomy

Nitrobacter winogradskyi → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGGTCGATAAGGTTCCGATGACCCGAGGTGGACACGCCGCCCTCGCAGACGAACTGAAGAAGCGTCAATCGGTGGACCGGCCGCGCATCATCGAGCAGATCGCCGAGGCGCGCTCGCATGGCGATCTGTCGGAAAACGCGGAGTATCACGCCGCCAAGGAAGAGCAATCGCACAACGAGGGTCGCATCGCGGAGCTGGAGGACAAGCTGGCGCGCGCGGACATCATCGATGTCAGCAAGCTGTCCGGCGACACCATCAAGTTCGGCGCCACCGTGACGCTGATCGACGAAGACACCGACAAGAAGGCGGTGTGGCAGATCGTCGGCGAAGCCGAGGCCGACGCCAAGAAGGGTCGCATTTCAATCACCTCGCCGCTCGCTCGCGCCCTGATCGGCAAGAAGAAAGGCTCTTCGGTTGAAGTCGTCGCGCCCGGCGGCGCAAAAGCCTACGAGATCGCCAAGGTCGAGTGGCGATAG
PROTEIN sequence
Length: 159
MVDKVPMTRGGHAALADELKKRQSVDRPRIIEQIAEARSHGDLSENAEYHAAKEEQSHNEGRIAELEDKLARADIIDVSKLSGDTIKFGATVTLIDEDTDKKAVWQIVGEAEADAKKGRISITSPLARALIGKKKGSSVEVVAPGGAKAYEIAKVEWR*