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SCNpilot_cont_500_bf_scaffold_5795_6

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_12_partial

partial RP 22 / 55 MC: 1 BSCG 23 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 3373..3765

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 97.7
  • Coverage: 130.0
  • Bit_score: 252
  • Evalue 7.60e-65
DNA-directed RNA polymerase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; Short=RNAP omega subunit {ECO:0000255|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00366};; RNA polymerase omega subunit {ECO:0000255|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 130.0
  • Bit_score: 252
  • Evalue 3.40e-64
DNA-directed RNA polymerase subunit omega n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=RPOZ_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 130.0
  • Bit_score: 252
  • Evalue 2.40e-64

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGGCGCGCGTCACCGTGGAAGACTGCATTGACAAGGTCGACAACCGGTTCGACCTGGTTCTCTTGGCCGCGCACCGTGCGCGGATGATTTCGTCGGGCTCGCAACTTACGATTGACCGCGACAACGACAAGAATCCGGTGGTTTCGCTCCGTGAAATCGCGGAGCAGACCATTTCGCCCGAAGACATGCGCGAGGAGCTGGTTCATTCCTTGCAGAAGTTTGTCGAGGTCGACGAGCCGGAGCCGGATACTGTGCCCCTGATCGGCTCGGCCGGGGCGAGCGTCGATGCCGACGACACCGAGGTCGCGCTCGAACGCATGACCGAGGAAGAGTTACTGAAGGGTCTGGAAGGGCTCGCACCTCCCGAAGAGCAGCCCGAAGAGGACGAGTGA
PROTEIN sequence
Length: 131
MARVTVEDCIDKVDNRFDLVLLAAHRARMISSGSQLTIDRDNDKNPVVSLREIAEQTISPEDMREELVHSLQKFVEVDEPEPDTVPLIGSAGASVDADDTEVALERMTEEELLKGLEGLAPPEEQPEEDE*