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SCNpilot_cont_500_bf_scaffold_7770_6

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_12_partial

partial RP 22 / 55 MC: 1 BSCG 23 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3866..4498)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRN4_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 230.0
  • Bit_score: 372
  • Evalue 3.40e-100
  • rbh
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 230.0
  • Bit_score: 372
  • Evalue 1.10e-100
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 230.0
  • Bit_score: 372
  • Evalue 4.70e-100

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGCAACAGGTTCAGTCCCGCGAAGGCGCCATCCGCGCCATCATGCAGGCGAACAACCGCAAGCTCTACCGGATCGCCCGCGGCATCCTTCGCAACGACAGCGAGGCCGAGGACGTCGTGCAGGAAACGTACGTTCGTGCCTTCACGCATCTCGAGAGCTTTCGTGGCGATGCTCGTCTGGCGACCTGGCTCGCGCGCATCGCCATGAACGAGGCGCTCGGCCGGCTGCGGCGCCAGCGTCCGAGCGTCGACTGGACCACCATGGAGCCTGTCGCCTCGGATGCCCGCATCATCCAGTTTCCCGGGTCCGCCACTACCGATGATCCGGAAAAAACCATGGCTCAGCGCGAAATGCAGCACATCGTCGAGCAGGCGGTTGACGAACTGCCCGAAGCTTTCCGCATCGTCTTCATCACCCGCGTGATCGAAGGAATGAATGTGGAGGAAACCGCCGAGATTCTCGACCTCAAGCCGGAAACCGTGAAGACGAGGCTTCATCGCGCCCGCGCGATGCTGCGCAAAAACATCGAGAAGAAGATCGGTCCGGTGGTGATGGAGGCGTTTCCCTTCGCCGGCAGACGGTGCGCGCGTCTCACCGATGCGGTTCTGGGCCGGCTCGGCCTCACCAAATAA
PROTEIN sequence
Length: 211
MQQVQSREGAIRAIMQANNRKLYRIARGILRNDSEAEDVVQETYVRAFTHLESFRGDARLATWLARIAMNEALGRLRRQRPSVDWTTMEPVASDARIIQFPGSATTDDPEKTMAQREMQHIVEQAVDELPEAFRIVFITRVIEGMNVEETAEILDLKPETVKTRLHRARAMLRKNIEKKIGPVVMEAFPFAGRRCARLTDAVLGRLGLTK*