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SCNpilot_cont_500_bf_scaffold_25951_1

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_12_partial

partial RP 22 / 55 MC: 1 BSCG 23 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 3..962

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 290.0
  • Bit_score: 559
  • Evalue 2.40e-156
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 290.0
  • Bit_score: 558
  • Evalue 1.20e-156
DNA-directed RNA polymerase subunit beta' n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVQ8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 290.0
  • Bit_score: 559
  • Evalue 1.70e-156

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Taxonomy

Nitrobacter sp. Nb-311A → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATCCAGTACGGCGCGCGCATGCATGTCGACGAGGGCGATCAGGTCAAGCGCGGCCAGCGGATCGCCGAGTGGGATCCCTACACCCGGCCGGTTCTGACCGAGGTGGAGGGCACCATCGGATTCGAAGACCTGATCGAAGGTCAGTCGATCTCCGAAACGCTCGACGAATCCACCGGTATCGCCAAGCGCATCGTCATCGACTGGCGCGGCACGCGCGGCGGAGCGGATCTGCGCCCGGCCATCGTGATCAAGGGCAAGGACGGCAAGGTGCTGAAGCTCGCACGTGGCGGCGATGCCCGCTACATGCTGTCGGTCGACGCCATTCTGTCGGTCGACGTCGGAGCCAAGGTGAAGCCGGGCGACATTCTTGCGCGTATCTCGACCGAGAGCGCCAAGACCCGCGACATCACCGGCGGTCTGCCGCGGGTGGCCGAACTGTTCGAGGCCCGCAGGCCGAAGGACGCGGCCATCATCGCTGAAATCGCCGGCACCATCCGATTCGGCCGCGACTACAAGAACAAGCGCCGCATCTCCATCGAACCGGTCGACAAGGAAGAGGAGGCTCGCGAGTACCTCATTCCGAAGGGCAAGCACATCCATCTGCAGGATGGCGACATCGTCGAGAAGGGTGACTTCATCGTCGAGGGCAATCCGGCGCCGCACGACATCCTGGCGATCAAGGGCATCGAGGAGCTCGCTGCCTATCTGGTCAACGAAATCCAGGAAGTCTACCGGTTGCAGGGCGTGCTCATCAACGACAAGCACATCGAGGTGATTGTCCGTCAGATGCTCCAGAAGGTCGAGATTACCGATCAGGGCGAGACCGACATGATCTCGGGCGAGCAGATCGACAAGATCGAGTTCGACCGGCGACCACCCGCGTGCTCACCGAAGCCGCCGTCAACGGCAAGGTGGACCCACTCGAAGGCCTCAAGGAAAACGTCATCGTCGGCCGGCTGA
PROTEIN sequence
Length: 320
IQYGARMHVDEGDQVKRGQRIAEWDPYTRPVLTEVEGTIGFEDLIEGQSISETLDESTGIAKRIVIDWRGTRGGADLRPAIVIKGKDGKVLKLARGGDARYMLSVDAILSVDVGAKVKPGDILARISTESAKTRDITGGLPRVAELFEARRPKDAAIIAEIAGTIRFGRDYKNKRRISIEPVDKEEEAREYLIPKGKHIHLQDGDIVEKGDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEITDQGETDMISGEQIDKIEFDRRPPACSPKPPSTARWTHSKASRKTSSSAG*