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SCNpilot_cont_500_bf_scaffold_802_3

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 12 / 38
Location: 1504..1965

Top 3 Functional Annotations

Value Algorithm Source
putative very short patch repair protein; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 149.0
  • Bit_score: 243
  • Evalue 4.20e-62
DNA mismatch repair protein Vsr n=1 Tax=Burkholderia pseudomallei RepID=UPI00016AE51F similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 146.0
  • Bit_score: 252
  • Evalue 3.70e-64
DNA mismatch repair protein {ECO:0000313|EMBL:KEH13460.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 153.0
  • Bit_score: 258
  • Evalue 5.60e-66

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Taxonomy

Delftia tsuruhatensis → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGCTTCGAGCCGTGCCCTCGTCATCTGCCGTCAGTCGTCGGATGGCGAAAGTGCGGCAGAAAGGGACAGGGGCGGAAATAGCGCTGCGGCAGGAGATGCATCGCATCGGTCTGCGCTATAGGATCGACTACGAAGTACTGAAAAAGCCCCGCCGCGTGGCGGACGTGGCATTCCCTGGTCGAAAGATCGCCGTCTTCGTCGATGGTTGCTTTTGGCATGGTTGTCCCAAACACGCTACGTGGCCCAAGCGGAATGCGGAATTCTGGCGGCAGAAGATCGAAGCGAATCGACAACGGGATGCGGACACAAACGATCGTTTGCGATCTCTCGGCTGGACGGTGCTACGGTTTTGGTCGCATGAATCCCCGGTCGAGGCTTCCAAGACTGTCGCAAGTGCAGTAGTCGAGGTCGACTCGAAACGACACGCCTCATCTTCAGTTGGCGCGGACGAGAGAAACTGA
PROTEIN sequence
Length: 154
MLRAVPSSSAVSRRMAKVRQKGTGAEIALRQEMHRIGLRYRIDYEVLKKPRRVADVAFPGRKIAVFVDGCFWHGCPKHATWPKRNAEFWRQKIEANRQRDADTNDRLRSLGWTVLRFWSHESPVEASKTVASAVVEVDSKRHASSSVGADERN*