ggKbase home page

SCNpilot_cont_500_bf_scaffold_464_15

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 24536..26545

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase (EC:4.2.1.70); K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 680.0
  • Bit_score: 987
  • Evalue 2.90e-285
  • rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 680.0
  • Bit_score: 987
  • Evalue 1.30e-284
Pseudouridine synthase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPI8_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 680.0
  • Bit_score: 987
  • Evalue 9.20e-285
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter winogradskyi → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2010
ATGCTCATCCTCGGGGTCGGCGTCGCCGCCGGCCGGTTGCTTTTGCGAGAACATTCATGCCCCGCGATACCGATAAAGACAATGCACGTGGCCGGCGTGATCGTCCCCCAGGCGGCAAGCAAGCGGTCCTCAACCGGCAAGGCTGCTGGTGCGAAACCCTATGCCCGGACGTCACCGGCGGGTGCGAGGAAACCCTATGCGGGCAAACGCGATGGCGGTGACGCCGCGCGGCCTCGCTTCAAACGCGACGACGGCGGCGACAAGCGTGCCTACGCGCCGCGCGGGGATTCACCCCGCGGTGAGCGGCCGGCCTTCAAACGTGACGATCGCGCGCCGCGCGCTGACCGTGACGAGGCGCGCCCTGCAAGGCGCTTTGCCGATAAGAAATTCGGGGAGAAACCTCCCTACACCCCGCGAGGCGAAGGTTTCCGGAAAGACGGCGACCGCCCGCAGCGTGCGCGGCCGCAAGGCGATCGGCCTTATGGCGCGCGTCCGCCGCGCCAGGGCGGTGGCGAGAAGCGCGCTTATGAGCCGCGCGGGGATCGCCCTGCCGGTGACAGAAAGTTTTCACGCGGTGCGGCGGATCGTGGTTCGCGCGGGACGCGCAAGGAGTTCGGCGACCGTCCGGAACGTGGCGAATCCAAGCCTTGGGAGAAGCGCGATGCCCGCCCGCGCGATGATCGCGGCGGCGCAGGGCGTCCACGGTTCTCGAAATCGCGGGATGAACGTGCTGCGGGCGGCGAGCGTGGCCCGCGCACGTTTGATCGTCCGCAAAGCGAGCGTCCGCGCTTCGATCGCCCGCGACAGGATCGTTCTGCAGGTGACCGTCCTCGCAACGAACGCAATGCGTGGCAGGAACGCCCGCGCCGGGAGGATCGCGACGATCGCCCGCGCCGTGACAATGAGGACGACAGCAAGGTCTTCGCGAAACGCCCGGCGTTCGGTGGGCGCGGCGCCTATCGGGAGCGCAGGCCTGACGACGACCGCCGCGGCGCGCGGCCGGAGCCGAAGCCGAAGAAGGCCGGCGAGCGCATCGCGAAAGTGATGTCGCGCGCGGGTCTCGCCTCGCGCCGCGACGCCGAGGAATGGGTCACGCAGGGCCGCGTCGCCGTCAACGGCCGCGTCATCAACTCGCCGGCGCTCGACGTCACCTCGCGCGACGTCATTACCGTGGATGGTCAGCCGTTGCCCGAGCGCGAGCGTACCCGGCTGTTTCTCTATCACAAGCCGCGCGGATTGATGACGACCCACGCCGATCCCGAAGGACGGCCGACCGTGTTCGACAATCTGCCGGCAGGTCTGCCGCGGCTGATCAGCGTCGGCCGGCTCGACTTCAACACCGAAGGATTGCTGCTGCTGACCAATGACGGCGGTCTGGCGCGCGCGCTGGAACTGCCGGACACCGGCTGGCTCAGGCGTTACCGCGTCCGCGCCCACGGCGAGGTGACGCAGGCGCAACTCGATGCGCTGAAGCATGGCGTCGAGGTCGACGGCGTCAAATACGGCTCGATCGACGCCACGCTCGAGCGTGATCAGGGCGCGAATGTGTGGCTGACGTTCGCGATCCGCGAGGGCAAGAACCGCGAGGTGCGCAACGTGATGGCGCATCTCGGACTGGAGGTGAACCGGCTGATCCGTATTTCCTACGGTCCGTTTCAACTGGCCGAGATCGCGGAAGGTGAGGTCGAGGAAGTCAAGACCCGCGTGCTGCGCGAGCAACTCGGCGACAAGATCGCAGCGCTCGCCAACGCGAATTTCGCCGGCGCCGCCGCCGAAGCCGATGCTCCCAAGCTCGGCCGCGACGGCACGCCGCTGCGCTCTAAGAAGGACAACAAGGAGAGAACGAAACGTTCGTTGATCGAGGATCGCAAGGGCCGCAGCGTCGTGGTGCAGCGGACCGGCAGCGACGAGGCGCGGGCGCGCAACGAGGCCGAGGCCAACGGTTACGGTCCGCCGCGCCGGCCGAAACGCGGCTATCATGGCAAGCGCGATCTGACTCCGCGAGACTGA
PROTEIN sequence
Length: 670
MLILGVGVAAGRLLLREHSCPAIPIKTMHVAGVIVPQAASKRSSTGKAAGAKPYARTSPAGARKPYAGKRDGGDAARPRFKRDDGGDKRAYAPRGDSPRGERPAFKRDDRAPRADRDEARPARRFADKKFGEKPPYTPRGEGFRKDGDRPQRARPQGDRPYGARPPRQGGGEKRAYEPRGDRPAGDRKFSRGAADRGSRGTRKEFGDRPERGESKPWEKRDARPRDDRGGAGRPRFSKSRDERAAGGERGPRTFDRPQSERPRFDRPRQDRSAGDRPRNERNAWQERPRREDRDDRPRRDNEDDSKVFAKRPAFGGRGAYRERRPDDDRRGARPEPKPKKAGERIAKVMSRAGLASRRDAEEWVTQGRVAVNGRVINSPALDVTSRDVITVDGQPLPERERTRLFLYHKPRGLMTTHADPEGRPTVFDNLPAGLPRLISVGRLDFNTEGLLLLTNDGGLARALELPDTGWLRRYRVRAHGEVTQAQLDALKHGVEVDGVKYGSIDATLERDQGANVWLTFAIREGKNREVRNVMAHLGLEVNRLIRISYGPFQLAEIAEGEVEEVKTRVLREQLGDKIAALANANFAGAAAEADAPKLGRDGTPLRSKKDNKERTKRSLIEDRKGRSVVVQRTGSDEARARNEAEANGYGPPRRPKRGYHGKRDLTPRD*