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SCNpilot_cont_500_bf_scaffold_464_19

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(28229..29206)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase (EC:4.2.1.70); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 326.0
  • Bit_score: 547
  • Evalue 2.20e-153
  • rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 326.0
  • Bit_score: 547
  • Evalue 9.80e-153
Pseudouridine synthase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPV6_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 326.0
  • Bit_score: 547
  • Evalue 7.00e-153
  • rbh

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Taxonomy

Nitrobacter winogradskyi → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
GTGCGCCTTGATCGGGTCCTCGCAACGCACAGTCCTGAGCTGTCGCGCTCCCGCCTGAAGTCGCTGATTCTGGCGGGTCAGGTCCTCGTTGCAAAACCTTCCATTGCACAGGACTCGGCCAAGGCTGCCCCCATTCGCGACCCCGCTTATCATGTCGCTGCCGGCGATACGATCACAATCGACGTGCCGCCCGCAATATCTGCCGAACCGAAAGGGGAAGCCATTGCGCTCGATGTCGTTTACGAGGACGACGATCTGATCGTCGTCAACAAGCCGAAGGGGCTGGTCGTCCACCCCGCCGCGGGGCACGAGACGGGGACGCTGGTCAATGCCCTCATAGCACATTGCGGCGAAAGCCTGTCCGGCATCGGGGGCGTCCGCCGCCCCGGCATCGTGCATCGGCTGGACAAGGACACCACCGGCCTCATGGTCGCGGCCAAGAATGACGCCGCGCACAAGTCGCTGAGCGCGCAATTCGCCGATCACGGACGCACAGGCGCGCTGCAGCGGGGCTATCTGGCTTTTGTGTGGGGACTGCCAAACCGTCCGCACGGCACCGTGGACGCGCCCATCGACCGCCATCCCTATGCCCGCGAAAAGATGGCCGTGCGGGCGGGCGGACGCGAAGCGATCACCCATTGGGAGGTGCGGGAGGCCTTCAATAGCCGCGACGGCAAACCGGTTGCCGCCCTCCTCGCCTGTCAGCTCGCGACCGGCCGTACCCATCAGATCAGGGTACACCTCGCTCATGCCGGCCACCCCTTGTTGGGCGACGGCGTCTACGGCCCGCATTTCAAGACCAAGGCCAATCAATTAGGATCATCAGCCCGGACTGCCCTCGGTGCCCTTGAGCGGCAGGCGCTCCACGCTTATCTGTTGGTAATCGAACATCCCAGGACCGGAGAGGTGCTGCGGTGGGAGGCGGACCTGCCGGAGGACCTGCTTCTGCTGAAGGCGGCCCTGGCGGCGACGGAATGA
PROTEIN sequence
Length: 326
VRLDRVLATHSPELSRSRLKSLILAGQVLVAKPSIAQDSAKAAPIRDPAYHVAAGDTITIDVPPAISAEPKGEAIALDVVYEDDDLIVVNKPKGLVVHPAAGHETGTLVNALIAHCGESLSGIGGVRRPGIVHRLDKDTTGLMVAAKNDAAHKSLSAQFADHGRTGALQRGYLAFVWGLPNRPHGTVDAPIDRHPYAREKMAVRAGGREAITHWEVREAFNSRDGKPVAALLACQLATGRTHQIRVHLAHAGHPLLGDGVYGPHFKTKANQLGSSARTALGALERQALHAYLLVIEHPRTGEVLRWEADLPEDLLLLKAALAATE*