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SCNpilot_cont_500_bf_scaffold_943_41

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 34321..34875

Top 3 Functional Annotations

Value Algorithm Source
Sigma-24 (FecI-like) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFK5_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 184.0
  • Bit_score: 334
  • Evalue 9.00e-89
Bradyrhizobium elkanii strain UASWS1015 Contig152, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52992.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 184.0
  • Bit_score: 356
  • Evalue 2.40e-95
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 184.0
  • Bit_score: 334
  • Evalue 2.80e-89

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Taxonomy

Bradyrhizobium elkanii → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGACGAAGGAGTCCGACCTCAAAGCGCTCATGACGGCGAGCCTCCAAGGCGACTCCATCGCGCATCGATCGCTGCTGACGGCTTTGAGCGGACATCTGCGGAGCTACTACAAGAGCAGACTTTTGCGATCCGGACGCCCGGCCGAGGAAACTGAAGACCTCGTGCAGGAAGCCTTGATCGTCATCCACACGCAACGTCACACCTACGATCCGGAGCAGCCGCTGACGCCGTGGGTGTACGCCATTGCCCGCTACAAGCTGATCGACCATTTGCGGCGCACCAGGACCACGACGGCGGACGTGCCATTGGAAAACGCCGAATACATCCTGGCATCCGACGACAACGCCGCCGCTGAAAGCCAACTCGATCTCGCCAAGCTCTTTGAGAGGTTACCGGAACGAATGAGACTTTCGCTCCAATACGTGAAGCTCGACGGCCTGAGCGTGGCCGAGGCCGCCGATCGTAGCGGGATGTCGCCATCCGCCGTCAAGGTCAACATTCACCGAGGGCTGAAGATCCTCACCGCATTGATTGCACGGGAGACCAAAGCGTGA
PROTEIN sequence
Length: 185
MTKESDLKALMTASLQGDSIAHRSLLTALSGHLRSYYKSRLLRSGRPAEETEDLVQEALIVIHTQRHTYDPEQPLTPWVYAIARYKLIDHLRRTRTTTADVPLENAEYILASDDNAAAESQLDLAKLFERLPERMRLSLQYVKLDGLSVAEAADRSGMSPSAVKVNIHRGLKILTALIARETKA*