ggKbase home page

SCNpilot_cont_500_bf_scaffold_1836_6

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 3605..4828

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobia similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 407.0
  • Bit_score: 758
  • Evalue 3.50e-216
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 407.0
  • Bit_score: 756
  • Evalue 5.10e-216
  • rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X102_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 407.0
  • Bit_score: 758
  • Evalue 2.50e-216
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter sp. Nb-311A → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
ATGAGTGCTGTTCCGTTGAAAAACGACAAGCCGGCTCAGGCCGGCGTCAGGACCGTAACGGTTCTGGGAGCAACCGGCTCAATCGGCGACAGCACGATGGATTTGCTGCGCGGTGCGCGCGGCCGCTACCGTGTCGAGGCGCTGACCGCGAATTCCAATGTCGAGGTTCTCGTCAAGCTCGCGCGGGAGTTTGACGCGCGGTTTGTCGCCGTCGCCGACACCTCGCGCTTTGGCGAGTTGAAGGATGCGCTCGCCGGCAGTGATATCGAGTGCGGCGTCGGTGAAAGCGCGATCATCGAGGCGGCTTCGCGGCCGGCCGACTGGTTGATGGCTGCAGTGAGCGGGGCGGCCGGGCTGAAGCCCGCGCTTGCGGCCGTCGATCGCGGGACGACGATCGCGCTTGCGAACAAGGAATGCCTGGTCTGCGCCGGCGATTTCTTCATGCAGCGCGCCGTCAAGGCCGGAGCCTGCATCCTGCCGGCCGATTCTGAACATAATGCGCTGTTTCAGGCCCTGAGTTCGGGAAACCGCGACGAACTTACGCGCGTGATCATTACCGCGTCGGGGGGGCCGTTCCGTACCTGGGCGGCAGCCGACATCGAGAACGCGACGCTGGCGCAGGCGTTGAAACACCCGAACTGGAGCATGGGGCGGAAGATCACCATCGACTCGGCGTCGATGATGAACAAGGGACTCGAAGTCATAGAGGCCGCCTGCCTTTTTGCGCTGGCGCCGGACGAGATCGACGTGCTGGTCCATCCGCAATCGATCGTCCACGGCATGGTCGAGTTCTCCGACCGCTCCGTCGTCGCTCAACTCGGCACGCCCGACATGCGGACCCCGATCGCGCATTGCCTCGGCTGGCCGGAGCGCATCGCGGGCCCGGCGACGAAGCTCGATCTCGCCAAGATCGGGCAACTGACGTTTGAGGCCCCGGATTTCACCCGGTTCCCGGCGTTGCGGTTGGCCTATGACGCGCTGAGGACAGGGAACGGCGCGACCACCGTCTACAATGCTGCGAACGAAATTGCGGTTGCGGCGTTCATCGCCGAGAAGATCAGATTCGGGGCCATCGCACGCCTCGTCGAAGCGACCCTGAATGGCTGGATCCGGGCGGGAAATCTCGCGCCTCTGGCGTCCGCCGACGACGCCATCGCCGTTGACCATAACGCGCGAAATATGGCGGCTTCGCTTTTGCCACAAATTGCCGCAAAGGCGTCCTAG
PROTEIN sequence
Length: 408
MSAVPLKNDKPAQAGVRTVTVLGATGSIGDSTMDLLRGARGRYRVEALTANSNVEVLVKLAREFDARFVAVADTSRFGELKDALAGSDIECGVGESAIIEAASRPADWLMAAVSGAAGLKPALAAVDRGTTIALANKECLVCAGDFFMQRAVKAGACILPADSEHNALFQALSSGNRDELTRVIITASGGPFRTWAAADIENATLAQALKHPNWSMGRKITIDSASMMNKGLEVIEAACLFALAPDEIDVLVHPQSIVHGMVEFSDRSVVAQLGTPDMRTPIAHCLGWPERIAGPATKLDLAKIGQLTFEAPDFTRFPALRLAYDALRTGNGATTVYNAANEIAVAAFIAEKIRFGAIARLVEATLNGWIRAGNLAPLASADDAIAVDHNARNMAASLLPQIAAKAS*