ggKbase home page

SCNpilot_cont_500_bf_scaffold_2399_5

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 3909..4859

Top 3 Functional Annotations

Value Algorithm Source
hemC; porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 316.0
  • Bit_score: 574
  • Evalue 2.80e-161
Porphobilinogen deaminase {ECO:0000255|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000255|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000255|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000255|HAMAP-Rule:MF_00260}; Short=HMBS {ECO:0000255|HAMAP-Rule:MF_00260};; Pre-uroporphyrinogen synthase {ECO:0000255|HAMAP-Rule:MF_00260}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 316.0
  • Bit_score: 574
  • Evalue 1.20e-160
Porphobilinogen deaminase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=HEM3_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 316.0
  • Bit_score: 574
  • Evalue 8.80e-161

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter winogradskyi → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
GTGCAATCCTCGGGTGAGACAGACATACTGGCGACGATCGGCACCCGCGGCAGCCCGCTGGCGCTGGCGCAGGCCCACGAGGTGCGAGACCGCCTGGCGCGGGCGCATCAGGTGGAGCCCGAGCGGATCGTCATCAAGACCATCCGGACCTCGGGCGATGCGATTCAGGATCGTCCGCTTTTCGACGTCGGCGGTAAGGGTCTCTTTACCAAGGAGATCGAGGAAGCCCTGCTGGCGGGCTCCATCGACTTCGCGGTGCATTCGTCCAAGGACGTGCCGACGTTCCTGCCCGACGCCACCTGGCTGCCGGCGTTTCTGCCGCGCGAGGACGTGCGCGACGTTTTCATCAGTCCGCATGCCGGTTCGTTGCACGATCTGCCGGCAGGCGCGACGGTCGGGACCGCATCGCTGCGGCGGCAGGCCATGGTTCTGCGGCTGCGCCCGGACCTCAAGGTCAGTTCGCTGCGCGGCAATGTCGAGACGCGGTTGCGCAAGATCGCGGCGGGAGAAGCGGACGCCACGCTGCTGGCGCTCGCCGGTCTCAATCGCCTCGGATTGCGGGACAGGGCGACCCGCGTTCTCGAGGTCGACGAATTCCTGCCGGCGGTCGGGCAGGGCGCCATCGCAATCGAGTCGCGCCGTGACGATGACCGCATCAATTCCTTCGTCGAGGCGATCGGCGATTCGGATACGGAAGTGGCGTTGAGCGCCGAGCGGAGTTTTCTGGCGCTGCTCGACGGCTCCTGCCGCACGCCGATCGGCGGCCATTGCCGCGTCAACGGCGACCGCATTCACTTTCGCGGCCTCATCATTTCTCCCGATGGCAAGGAGTCCTACGAGACGACGCGCGAAGGCGCGCGGGCCGACGCAATCGCGCTCGGGACGGATGCTGCGCGTGAACTGCGCGAGCGCGCCGGCGAGAAATTCTTCACATTGTTCGCAGGAGCGTGA
PROTEIN sequence
Length: 317
VQSSGETDILATIGTRGSPLALAQAHEVRDRLARAHQVEPERIVIKTIRTSGDAIQDRPLFDVGGKGLFTKEIEEALLAGSIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDVFISPHAGSLHDLPAGATVGTASLRRQAMVLRLRPDLKVSSLRGNVETRLRKIAAGEADATLLALAGLNRLGLRDRATRVLEVDEFLPAVGQGAIAIESRRDDDRINSFVEAIGDSDTEVALSAERSFLALLDGSCRTPIGGHCRVNGDRIHFRGLIISPDGKESYETTREGARADAIALGTDAARELRERAGEKFFTLFAGA*