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SCNpilot_cont_500_bf_scaffold_3860_1

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 3..1145

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 290.0
  • Bit_score: 559
  • Evalue 6.50e-157
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 290.0
  • Bit_score: 559
  • Evalue 2.90e-156
DNA-directed RNA polymerase subunit beta' n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=RPOC_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 290.0
  • Bit_score: 559
  • Evalue 2.10e-156

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Taxonomy

Nitrobacter winogradskyi → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1143
ATCCAGTACGGCGCGCGCATGCATGTCGACGAGGGCGATCAGGTCAAGCGCGGCCAGCGGATCGCCGAGTGGGATCCGTACACCCGGCCGATTCTGACCGAGGTTGAGGGCACTATCGGATTCGAGGACCTGATCGAAGGTCAGTCGATCTCCGAAACCCTCGACGAATCCACCGGCATCGCCAAGCGCATCGTCATTGACTGGCGCGGCACGCGCGGCGGGGCCGATCTGCGCCCGGCCATCGTGATCAAGGGCAAGGACGGCAAGGTGCTGAAGCTCGCGCGTGGCGGCGACGCCCGCTACATGCTGTCGGTCGACGCCATCCTGTCGGTCGACGTCGGCGCCAAGGTGAAGCCGGGCGACATACTTGCGCGTATCTCGACCGAGAGCGCCAAGACCCGCGATATCACCGGCGGTCTGCCGCGGGTGGCCGAACTGTTCGAGGCACGCCGGCCGAAGGACGCGGCGATCATCGCGGAAATCGCCGGCACTATCCGCTTCGGCCGTGACTACAAGAACAAGCGCCGTATCTCGATCGAGCCGGTCGACAATGAGGAGGAGACCCGCGAGTACCTCATTCCGAAGGGCAAGCACATCCATCTGCAGGATGGCGACATCGTCGAGAAGGGCGACTTCATCGTCGAAGGCAATCCGGCGCCGCATGACATCCTGGCGATCAAGGGCATCGAGGAGCTCGCCGCCTATCTGGTGAACGAAATCCAGGAGGTCTACCGGTTGCAGGGCGTGCTCATCAACGACAAGCACATCGAGGTGATCGTCCGTCAGATGCTGCAGAAGGTCGAGATTACCGATCAGGGCGAGACCGACATGATCTCGGGCGAGCAGATCGACAAGATCGAGTTCGACCGGCCCCGTTCGTTCTTCTCGGCCGCCTCGTTCCAGGAGACCACGCGCGTGCTCACCGAGGCCGCCGTCAACGGCAAGGTGGACCCGCTCGAAGGCCTCAAGGAAAACGTTATCGTCGGCCGGCTGATCCCGGCAGGCACCGGCGCCTCGATGGCCAAGATTCGCGAAGTTGCGGTCAAGCGCGACAAGCTGATTCTCGACGAACGCGAAAAGCAGGCTGCGATTGTGCCGTCCGCGCCCGAGGCCGAACCGTTGGCGCTTCCGCCGGCGGAGTAG
PROTEIN sequence
Length: 381
IQYGARMHVDEGDQVKRGQRIAEWDPYTRPILTEVEGTIGFEDLIEGQSISETLDESTGIAKRIVIDWRGTRGGADLRPAIVIKGKDGKVLKLARGGDARYMLSVDAILSVDVGAKVKPGDILARISTESAKTRDITGGLPRVAELFEARRPKDAAIIAEIAGTIRFGRDYKNKRRISIEPVDNEEETREYLIPKGKHIHLQDGDIVEKGDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEITDQGETDMISGEQIDKIEFDRPRSFFSAASFQETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMAKIREVAVKRDKLILDEREKQAAIVPSAPEAEPLALPPAE*