ggKbase home page

SCNpilot_cont_500_bf_scaffold_7523_15

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 13012..14208

Top 3 Functional Annotations

Value Algorithm Source
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRU8_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 398.0
  • Bit_score: 711
  • Evalue 5.80e-202
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 398.0
  • Bit_score: 711
  • Evalue 1.80e-202
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ABE61049.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 398.0
  • Bit_score: 711
  • Evalue 8.20e-202

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGGCGGACCCGTTCAAATCGAAACCTGAACGTCCGGGCATGACCCGCCGGGCGGCGTTGGGTTTTGTCATTGGCGCGCCCTTGCTCGGAGCCTGCTCGGGCGTCCAGCAATCGCTGATCGGTTCGTCCACCCAGCCGTCGACGGCCACGCCGGCTCGGCAGGGCGTCACGATCGGAACGGGCCAGGTCAAGGTGGGACTGGTCCTCCCGTTGTCGGCTGCGGGCAATGCCAGCATCGCGGCGCAGTCGATGAAGAATGCCGCCGAAATGGCGCTGGCTGAGTTTCAGAACCCGAATATCCAGTTGCTGGTCAAGGACGATGCCGGTTCGGCGCAAGGCGCGCAGCAGGGCGCGCAACAGGCCCTTGATGACGGCGCCGAAATCATCCTCGGTCCGCTGTTTGCTGCGTCCGTTCCGGCGACCGCGCAGGCGGCGCGCACGCGCGGCATTCCGGTGATTGCGTTCTCGACCGATTCAAGCGTTGCGGGCCGGGGCGTCTATCTCCTGAGCTTTCTTCCTGAGTCCGATGTGAACCGGATCGTCGAATATGCCGCAAGCGTCGGAAAGCGCTCGTTTGCCGCCATGGTGCCCGAAAACGCCTACGGCAACGTGGTTGAGGTCGCCTTCAAGCAGACGGTCGGGCGGCACGGCGGGCGGATCGTCGCATTCGAGAAATACGGCGCGGATCGTGCCGGCGCGGCGAAGAATGTGGCGCAGTCGCTTCGCTCGGCCGATGCGCTGCTTATCGCCGATGACGGCGATGCGGTGGTCTCAGTTGCGGATGCGCTCACGGCGGCCGGCGCCAACCTGCGCAACGTCCAGCTTCTCGGCACCGGCCTGTGGGACAACCCACGCGTCTTCGCCAGCGCCGCGCTGCAAGGCGGTCTCTACGCCGCTCCCGACCCGTCCGGCTTCCGCGCCTTCGCGGGCCGTTACCGCGCCAAATTCGGCGGCGAGCCGGTGCGCACGGCGACCCTTGCCTATGATGCGGTGGCGCTGGTCGCGGCTCTCGCCCGCACCCAGGGGCCGCAGCGCTTCGCGGCGGAGACGCTGACAAACCCGTCCGGTTTTGCTGGCATCGACGGCCTGTTTCGATTTCGTTCGGACGGCACCAACCAGCGGGGCCTCGCCGTCATGCGTGTCGCGTCCGGTGGTGGCCAGGCGGTTGCCGGATCGCCCAAGAGCTTTGGCGCCTGA
PROTEIN sequence
Length: 399
MADPFKSKPERPGMTRRAALGFVIGAPLLGACSGVQQSLIGSSTQPSTATPARQGVTIGTGQVKVGLVLPLSAAGNASIAAQSMKNAAEMALAEFQNPNIQLLVKDDAGSAQGAQQGAQQALDDGAEIILGPLFAASVPATAQAARTRGIPVIAFSTDSSVAGRGVYLLSFLPESDVNRIVEYAASVGKRSFAAMVPENAYGNVVEVAFKQTVGRHGGRIVAFEKYGADRAGAAKNVAQSLRSADALLIADDGDAVVSVADALTAAGANLRNVQLLGTGLWDNPRVFASAALQGGLYAAPDPSGFRAFAGRYRAKFGGEPVRTATLAYDAVALVAALARTQGPQRFAAETLTNPSGFAGIDGLFRFRSDGTNQRGLAVMRVASGGGQAVAGSPKSFGA*