ggKbase home page

SCNpilot_cont_500_bf_scaffold_14216_2

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(593..1555)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q218E7_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 290.0
  • Bit_score: 417
  • Evalue 1.40e-113
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 290.0
  • Bit_score: 417
  • Evalue 4.40e-114
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABD87239.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 290.0
  • Bit_score: 417
  • Evalue 2.00e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGTTGGGGGCGCGGCGCCTTGCAATTCCTCACTGTCGCGGGCTTCAGCCTCACACGGATCAAGTTGGCCGGATTGTGGGCTTCATGACGCTGGAACAATTGCGCATCTTCATTGCGGTTGCGGAACGGCAACACGTCACGCAGGCCGCGGGCGAGTTGAATTTGACGCAATCGGCAACGAGTGCCGCTATCGCATCGCTGGAGACGCGTTACGGCATAAAGCTGTTCGATCGTATCGGACGTGGCATCGTGCTGACGCAAGCGGGACGCGACTTCCTTTACGAAGCCCGTGGCGTCGTGGCCCGCGCCAAGGCGGCGGAGCAGATACTAAATGATCTGGCCGGTCTAAAGCGCGGATCGTTGACGATCGCAGCCAGCCAGACGGTGGCGAATTACTGGTTGCCCGGGCGTATCCAACAATTTCAAGCGGCCCATCCAGGCATCGACCTTCGAATCACGATCGCAAACACGGAACAGGTGACACAGGCCGTCCATAACGGCATCGCGGACCTTGGATTTGTCGAAGGCGAGACCAGCGATCCTCTGCTGGCCGTTCGGAAAATCGAGGGAGACTCGTTGATCGTCGTCGTTGGCAGGAAGCATCCCTGGGCCGGCCAGACCAGGATTGCGCCGAAAAGCCTGACTGCCACGGGCTGGATCTTGCGAGAGCCCGGTTCCGGTACCCGATCGATGTTCGAGGCCGCACTTGGAAAATTTGGGCTGAACATATCGGATCTTGTAATCAGGCTCGAATTGCCGTCGAACGAGGCCGTGCGCATGACCGTCGAGTCGGGCGATTGCGCGACCGCGATATCTGACCTGGTCGTGGCACAATCGCTGAAAGCCGGAACGCTTCATCGCGTCAGGATCGAACTCCCGCGACGCTCCTTCTTTGTTTTGCGGCACAAAGAGCGTTATGCCAGTCAGGCACAGAAAGCGTTGCTCGCATCGTTCCGGATCTGA
PROTEIN sequence
Length: 321
MLGARRLAIPHCRGLQPHTDQVGRIVGFMTLEQLRIFIAVAERQHVTQAAGELNLTQSATSAAIASLETRYGIKLFDRIGRGIVLTQAGRDFLYEARGVVARAKAAEQILNDLAGLKRGSLTIAASQTVANYWLPGRIQQFQAAHPGIDLRITIANTEQVTQAVHNGIADLGFVEGETSDPLLAVRKIEGDSLIVVVGRKHPWAGQTRIAPKSLTATGWILREPGSGTRSMFEAALGKFGLNISDLVIRLELPSNEAVRMTVESGDCATAISDLVVAQSLKAGTLHRVRIELPRRSFFVLRHKERYASQAQKALLASFRI*