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SCNpilot_cont_500_bf_scaffold_19346_5

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 3582..4229

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036C21FC similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 213.0
  • Bit_score: 369
  • Evalue 1.70e-99
TRAP transporter, 4TM/12TM fusion protein similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 212.0
  • Bit_score: 368
  • Evalue 2.10e-99
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:ABD89922.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 212.0
  • Bit_score: 368
  • Evalue 9.20e-99

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGTCCGCCGAGAGATTCGAGATGTCGCAGCCGCAAGCCGCCGCGGCGCCCGTCACGCAGTTCGATAATTTCGAACACGGATTCCCCGCGGGGTTCGGTCCCGGCGGCTGGGGACACCTTGCTTATGCCATCGGCATTGCATTTGCCGCCTTCCAGATCGTGATCGCGGCGTGGAATGTGCTCCCGAGCCAGGTGGTGCGTGGCGTCCATGTCGGCTTCCTGATCCTGATGACGTTCGGGCTGGTGGCCAACTTCACCGCGAAGAGCAATGCGGGCCGCGCGGCCGGCTGGTTCATCGGCGGCATCGGATTTCTGTGCGGCCTTTACCAGTGGATCTTCTACGCCGACCTGATCCTGCGTGACGGCGATCCCACCACGCTCGATCTGGTGGTCGGAACCGTGCTCGCCGTGCTGATCTTTGAAGGTACGCGGAGGCTGATGGGTCTCGCGCTGCCGCTGATGTGCGGCGCCTGCATCGTCTACTGGTTCTTCGGGCAATATCTTCCGGCGCCCTTCAATCATCGCGGCTATGCCTTCGATCAGATCATCACGCATCTGTCCTACGGCACTGAAGGGTTCTACGGCGTTCCGATCTATGTGTCCGCGACCTACATCTTCCTGTTCATCATGTTCGGCTCGTTCCTCGAA
PROTEIN sequence
Length: 216
MSAERFEMSQPQAAAAPVTQFDNFEHGFPAGFGPGGWGHLAYAIGIAFAAFQIVIAAWNVLPSQVVRGVHVGFLILMTFGLVANFTAKSNAGRAAGWFIGGIGFLCGLYQWIFYADLILRDGDPTTLDLVVGTVLAVLIFEGTRRLMGLALPLMCGACIVYWFFGQYLPAPFNHRGYAFDQIITHLSYGTEGFYGVPIYVSATYIFLFIMFGSFLE