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SCNpilot_cont_500_bf_scaffold_33983_2

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

near complete RP 42 / 55 BSCG 42 / 51 ASCG 7 / 38 MC: 1
Location: comp(575..1474)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Microbacterium sp. 292MF RepID=UPI000361AD79 similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 299.0
  • Bit_score: 579
  • Evalue 1.50e-162
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 299.0
  • Bit_score: 581
  • Evalue 9.60e-163
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 299.0
  • Bit_score: 577
  • Evalue 3.10e-162

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 900
GTGAAGGACTACCTGAAGCAGATCGGCAAGGTCCCGCTTCTGAACGCGGCCGAAGAGGTCGAACTCGCGATGCGCATCGAGGCCGGCCTGTTCGCCGAGGAGAAGCTGTCGCACATGTCCGCGGCGGAGAAGGCGACGCAGCTCGGCCTCGACCTCCAGTGGGTCGCGCGCGACGGTCAGCGAGCGAAGTCTCACCTGCTGGGCGCGAACCTCCGACTGGTCGTGTCGCTCGCAAAGCGGTACACGGGTCGTGGCATGCAGTTCCTGGATCTGATCCAGGAAGGAAACCTCGGACTCATCCGTGCCGTCGAGAAGTTCGACTACACCAAGGGCTTCAAGTTCTCCACCTACGCGACGTGGTGGATTCGCCAGGCGATCACGCGTGCGATGGCGGACCAGGCGCGGACGATCCGCATCCCGGTCCACATGGTCGAGGTCATCAACAAGCTCGCCCGCGTCCAGCGGCAGATGTTGCAGGACCTGGGTCGAGAGCCCACGCCCGAAGAGCTGAGCCGCGAGCTCGACATGACGCCCGAGAAGGTCGTCGAGGTGCAGAAGTACGGCCGTGAGCCCATCTCGCTGCACACGCCGCTCGGCGAGGACGGCGACAGTGAGTTCGGCGACCTGATCGAGGACACCGAGGCCGTCGTTCCCGCCGACGCCGTCGGATTCACGATGCTCCAGCGCCAGCTGGAGTCGCTTCTGGACTCGCTCAGCGAGCGCGAGGCCGGCGTGATCCGGATGCGTTTCGGTCTCGGCGACGGTCAGCCCAAGACGCTCGACCAGATCGGCGACACGTTCGGTGTGACCCGTGAGCGGATCCGTCAGATCGAGTCGAAGACGATGGCGAAGCTTCGTCACCCGAGTCGCTCGCAGTCGCTCCGGGACTACCTCGAGTGA
PROTEIN sequence
Length: 300
VKDYLKQIGKVPLLNAAEEVELAMRIEAGLFAEEKLSHMSAAEKATQLGLDLQWVARDGQRAKSHLLGANLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELSRELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDTEAVVPADAVGFTMLQRQLESLLDSLSEREAGVIRMRFGLGDGQPKTLDQIGDTFGVTRERIRQIESKTMAKLRHPSRSQSLRDYLE*