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SCNpilot_cont_500_bf_scaffold_4339_9

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_65_15

near complete RP 49 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(8779..9594)

Top 3 Functional Annotations

Value Algorithm Source
ABC polyamine/opine/phosphonate uptake family transporter, inner membrane subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP22_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 251.0
  • Bit_score: 339
  • Evalue 3.10e-90
Putative ABC transporter (Permease protein) {ECO:0000313|EMBL:KFC73261.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 266.0
  • Bit_score: 451
  • Evalue 6.10e-124
binding-protein-dependent transporters inner membrane component; K02053 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 268.0
  • Bit_score: 296
  • Evalue 9.60e-78

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
GTGAGCACCGGTTCGCCGCGATTGGGGCGCTACGCCCTGAACGGTGCGGCCGCGCTTTCGCTCGGCTTCATCCTGCTCCCGCTGATCTTCGTGACCTGGCTCGCCTTCTTCCGGCAGGAGATTCCCTCCTTCCCGCCGGAAGGCTATTCGCTGAAATGGTTCGCCGGGGCCGCGAGCAACAAGTCCTTCATCGACGGCTTCGAGCTGAGCCTGCAGATTGCCGTCGCAGCGACGCTGCTCGGGCTCGTGCTCGGAGTGCCGGCGAGCCTGGCCCTGGTGCGTCACCGCATTCCACTCGGGCCGGGCATCAGCACCTTCCTGCTGCTGCCCCTGGTGATGCCGGGCATCGTGCTGGGCACGGCGACCTATGTCTTCCAGATCGAGATCGAGCTTGCCACGCAGCTGCCGGTCATGGGCTCTCTCGGCGGGCTGATCGCGGCGCATACGCTCGTCGTGATTCCCTGGGTGGTGCGTCTGGTGACGGCCAGCCTCGCCGGCTTCGACCGCTCGATCGAGGAAGCGGCGCAGAACCTGGGCGCCGGGCCGGTCACGACGTTCTGGCGGGTGACGCTGCCGAGCATTCGGCCGGGCATCGTCGCGGCGGCCTTGTTCGGCTTCGTGACCTCGTTCGGCAATCTCGAAATGAGCCTCTTCCTGGTCGGGCCGGGCCGCACGACGTTGCCGATCGCGATCCTCCAGTATCTCGAGTGGAAGATCGACCCGACGGTGGCGGCAGCCTCCCTCATCCAGATCGTCCTGATCGGCGCCGCGATGATCGTGACCGATCGCTATGTCAAACTGAGCCGGGTGGTGTGA
PROTEIN sequence
Length: 272
VSTGSPRLGRYALNGAAALSLGFILLPLIFVTWLAFFRQEIPSFPPEGYSLKWFAGAASNKSFIDGFELSLQIAVAATLLGLVLGVPASLALVRHRIPLGPGISTFLLLPLVMPGIVLGTATYVFQIEIELATQLPVMGSLGGLIAAHTLVVIPWVVRLVTASLAGFDRSIEEAAQNLGAGPVTTFWRVTLPSIRPGIVAAALFGFVTSFGNLEMSLFLVGPGRTTLPIAILQYLEWKIDPTVAAASLIQIVLIGAAMIVTDRYVKLSRVV*