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SCNpilot_cont_500_bf_scaffold_400_22

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 49 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 22968..23342

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding, CRM domain-containing protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GJL9_NITSI similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 113.0
  • Bit_score: 126
  • Evalue 1.90e-26
RNA-binding protein {ECO:0000313|EMBL:KIO50396.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 113.0
  • Bit_score: 127
  • Evalue 1.20e-26
RNA-binding, CRM domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 113.0
  • Bit_score: 126
  • Evalue 6.00e-27

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGTTGACACTTACACCTGCACTCCGGCGGGCACTCGCCGCAACGGCTCATGGCATGCGGCCGATAGTGATGATTGGCGAGGCGGGACTCTCCGAAAATGTCCTGCATGAACTGGATCTGGGCCTTAAAAGCCATCAGCTGATCAAAGTCAAGGTTTCCATTGGAGAGAGGAAAATTCGAAATGGTTTGCTGGACGAGATATGCCGGCGCCTTGCGGCCGCGCCCGTTCAGCATATCGGAAAAATCCTGGTTATCTATCGACCGGAACCGGAACGCGCGGCACCCGAGCCGAAGGCGCGATTCGAAAGGAAGAAATCGGATGGAAGAAATACCGAGAAACCCGGCATCAGTTCTACGCTTCCTAAACGTATTTGA
PROTEIN sequence
Length: 125
MLTLTPALRRALAATAHGMRPIVMIGEAGLSENVLHELDLGLKSHQLIKVKVSIGERKIRNGLLDEICRRLAAAPVQHIGKILVIYRPEPERAAPEPKARFERKKSDGRNTEKPGISSTLPKRI*