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SCNpilot_cont_500_bf_scaffold_9092_2

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 49 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 1677..4592

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase associated protein RapA {ECO:0000313|EMBL:CQB48781.1}; EC=3.6.1.- {ECO:0000313|EMBL:CQB48781.1};; TaxID=666 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio cholerae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 949.0
  • Bit_score: 1594
  • Evalue 0.0
Helicase domain protein n=1 Tax=Pseudomonas sp. CF161 RepID=S6L0F6_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 949.0
  • Bit_score: 1576
  • Evalue 0.0
  • rbh
SNF2 family helicase-like protein similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 999.99
  • Bit_score: 646
  • Evalue 1.80e-182

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Taxonomy

Vibrio cholerae → Vibrio → Vibrionales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2916
ATGACGGCCAAAGGGACAGCACCGGAGCAAGGGCAGATTGTTAAATTGCGCCACAAGATATGGGCGGTCACGGCAGTTAATAAAACAAAAACGCAGTCAACTCAGGCCATCCATAGGGTGGCCTTAGAGTGCCTGAGCGACGATGCTCTTGGCGAAAATATCCAGGTTATTTGGGAACGGGAAATTGCCCCGCATTTTGTTGAGTCTACCTCACTACCAAGCATCACAGGCCATGATGAGCCAGAGATTTTTGACGCGTTCATCAGGTCTCTGCAATGGGGTTCCAGCTCCTTAGCTGTAGGCGATATGCTCCAAGCCCCCTTCAGGGGCGGGGTGCAAATGGAAGAATATCAGCTAGCCCCCGTCATTCGCGCCGCCAATATGCCCAGGGTACGCCTTTTGCTTGCCGATGATGTGGGTTTGGGCAAAACCATTGAAGCTGGCCTTGTTGCGCAAGAACTAATCCATAGCCACAGGGTAAGTCGAGTTTTGATCGTCTGCCCGGCACACCTAAAGATCAAATGGGTTGATGAAATGGCCGAGAAATTCGGCCTCGAGTTTAAAATCATTGACCGAGACTCTTTTCTTAAAATGAGAAAAGAGTACGGCACCAGCATTAACCCGTGGGCCAGTTTCCCGCGCTTGGTTACCTCAATTGATTACCTGAAGACCGAACACCCTCGCCGGTTATTTGATGAGTACGCTAGGCGCAGGCATGAGGAAAGCCCCAATAATCGTCCATGGGACCTGCTGATTCTCGACGAAGCTCATAACGCAGCACCTTCCGGGAAGAAGCAGTATGTTCGTGATTCGGAGCGCACATCATTGCTCCGCGCGATCTCCGAGCAGTTCGAGCACAAGATGTTTCTTACTGCCACACCCCACAATGGTTATCGGGAAAGTTTCACCGGCCTATTGGAAATTCTGGATAATCTTCGATTTTCGCGCGGCACTGACCTTGATAAGACACAACTCTCCGCTGTTACCATTCGGCGATTAAAGCAAGAAATTCTAAATCCAGATGGAACGCCACGCTTCCCTAAACGAGTGATTCTTCCTCGCAACGAGGCAAGCGATCCACATTTGTACGTCACATTGGAAGGCGACGAGCAGAGTCTATTTAATCTGCTTAAGGCTTATACGGATAGTCGATTGGCTTCCGTTGACAAACGCTCAGAGCGGCCACTTCAATTCATTCTTACCCTTTTGAAAAAACGAGCACTGTCTTCCCCCCTGGCATTGAGAGAGAGTCTCATCGTTCATACGACAAATGCAGGTGTAAAAGAAGAGCTTGGTATTGGTGAGTCTCTTTTTAAGAGCTTCGAGCAAAAGGAATCAGAAGACTGGAGTGATGATGGAGATAAAGAAGCCAATCTGGAGGCAGCTACCAGTGCCGCATCCAGACTCATCACGGAGCTTACAGATGATGAGAAAAGCATGCTACAGCGCATGTTTGAAATTGTTAATCGTCAAGTATCCCACTTCTTTATTCAGGAAGACAGCAAGGCAGCAGCTCTGATTGCCTGGATTAACCGCAACCTACGTAGTGGCAATCAGTGGAATGGTGAGCGCGTTATTATTTTTACCGAGTACAAACACACGCTCAACTATCTGGAACGTATCCTGGAAAAGCATGGTTTCCTTGATGCGACAAAAACAATTATTGGCGGCATGAATGATACAGACCGCAAAAAAATCAACGACGAGTTCCAATCGCCGAATAGCGAAACCAATGTACGCATTTTGCTGGCAACCGATGCTGCGTCTGAAGGTGCAGACTTTCAAAAATATTGCCGCAATCTTATTCACTATGAAATCCCATGGAACCCGATCCGTTTAGAGCAGCGCAACGGCCGTATTGATCGTCATGGTCAAAAAGCAAATGAAGTTCGCATCCATCATTTTGTCTATAAAAACCAAGAGGATTCCGAGTTCCTCAAACATATAGTCGACAAGGTTGAAACCATCAGAAATGACCTCGGCAGCGTTGGAGCCTTGATCGCGGACAGTGTCCGAAAGAAAGCCCTAGGCCAGACAGTGAATCTCGCTGAAATCGATGATGACGCCCGCAGAAGGCTTGCTCGTGACGAAATGGCCATTGAAGCACGAGAGAATGAGAGCGTCGCACAAATGGTCGAAGCGTTGAACCGAGCCCGTAGCGCGCTTGATATTTCTGATGATAACCAGCTTGATTTACTGAAGCAGGCATTACGACTGGAAGGGTGTCCAGAAGCAATCTGCGATCTCGGCAATGACGAATTTTCGTTAATCCGCGTCCCAACCGCCTGGACCGAATGCAAGGCCTACGTCAGTACAGACTACTTGCAAAAGCGCCTCTCATTTAATCGCATTAAAGCGAGAGAAGACGATGCAGTGGGAGTCGTCCACCTTGACCACCCGCTTATGCGGCGAGCTATTTCTACCTTTCGCATTCAGATGTGGGGGGCGCAATCTTCCCGTAGCGGTCTGAACAGAGTGACCATATCTGAGTCTGCTCAGGTAACGGTGCCGTCTGTCATCGCTTGGGGGCGGCAGGTTTTACTAGGATCTGAACATAACCGTCTTCACGAAGGTTTGGTTCGTTGTCAGCTGTCTATCGAAGGCGAAACAGTCGTAGAGAAGGAAATTAGTCGCCCAGAAGACGCCAACATCTTTGCTGGCAACTTAGAGGATGTTCAGGCAGTTATAGCACCGCACGTTGATGTGATCACGAGGCAGTTATCCATCAATGCTGAAGCAGAGGCCAAGTCATTGATTGCGACCCTGAATGATCGAGGCGAAGTAGCTCGGAAGCACGCTCAAAGTCTGGCTACCGAACGGATTACGGCCATCAGAAATACTATCAAACTTCGTATAACCCTGTTAAGGTTAATTCCGGCTGAGCCCCGCTATTTACATAGGTTTTTAAAGGTTTAG
PROTEIN sequence
Length: 972
MTAKGTAPEQGQIVKLRHKIWAVTAVNKTKTQSTQAIHRVALECLSDDALGENIQVIWEREIAPHFVESTSLPSITGHDEPEIFDAFIRSLQWGSSSLAVGDMLQAPFRGGVQMEEYQLAPVIRAANMPRVRLLLADDVGLGKTIEAGLVAQELIHSHRVSRVLIVCPAHLKIKWVDEMAEKFGLEFKIIDRDSFLKMRKEYGTSINPWASFPRLVTSIDYLKTEHPRRLFDEYARRRHEESPNNRPWDLLILDEAHNAAPSGKKQYVRDSERTSLLRAISEQFEHKMFLTATPHNGYRESFTGLLEILDNLRFSRGTDLDKTQLSAVTIRRLKQEILNPDGTPRFPKRVILPRNEASDPHLYVTLEGDEQSLFNLLKAYTDSRLASVDKRSERPLQFILTLLKKRALSSPLALRESLIVHTTNAGVKEELGIGESLFKSFEQKESEDWSDDGDKEANLEAATSAASRLITELTDDEKSMLQRMFEIVNRQVSHFFIQEDSKAAALIAWINRNLRSGNQWNGERVIIFTEYKHTLNYLERILEKHGFLDATKTIIGGMNDTDRKKINDEFQSPNSETNVRILLATDAASEGADFQKYCRNLIHYEIPWNPIRLEQRNGRIDRHGQKANEVRIHHFVYKNQEDSEFLKHIVDKVETIRNDLGSVGALIADSVRKKALGQTVNLAEIDDDARRRLARDEMAIEARENESVAQMVEALNRARSALDISDDNQLDLLKQALRLEGCPEAICDLGNDEFSLIRVPTAWTECKAYVSTDYLQKRLSFNRIKAREDDAVGVVHLDHPLMRRAISTFRIQMWGAQSSRSGLNRVTISESAQVTVPSVIAWGRQVLLGSEHNRLHEGLVRCQLSIEGETVVEKEISRPEDANIFAGNLEDVQAVIAPHVDVITRQLSINAEAEAKSLIATLNDRGEVARKHAQSLATERITAIRNTIKLRITLLRLIPAEPRYLHRFLKV*