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SCNpilot_cont_500_bf_scaffold_1409_13

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 45 / 55 BSCG 44 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 11323..12090

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, IclR family-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y444_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 35.7
  • Coverage: 255.0
  • Bit_score: 164
  • Evalue 1.30e-37
Uncharacterized protein {ECO:0000313|EMBL:KHK88979.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 245.0
  • Bit_score: 187
  • Evalue 2.60e-44
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 255.0
  • Bit_score: 164
  • Evalue 4.10e-38

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGGCGCGATCGGTCAAATCGGCGCGGCGAGCGTTGGAGGTGCTCGATCTCTTCGAGAAATTGCGTCGGCCGGCGGCGATAGGCGAGATCGCTGCCATGCTCGGCTATCCGCAATCGAGCACGTCGTTCCTGCTGAACGATCTGAGGCGCACCGGCTACCTCAACTATGATCTGGAAACACGGTGCTTTGCGCCGACCATTCGCGTGGCGCTTCTCGGCAGCTGGATCCATGCCGGGGCCTGCGGCCGTGACGAAATATCCGAGCTGTTGACCGGCGTGCGCGATCTCGCGCGTATGACGACGTTGCTTGCGACGCAGAACGGCCTCGACTTGCAGTACGTGCACGTCATCGAAACGCGCCAAACGCCCAAGCTTGCGCTTCGACCGGGAACATTGCGGCCGCTTTGTCGAGGGGCGGGCGGTCTTGCGTTGCTGGCCGAGCGCAGCGATGCCGACATCGGCCGCCTGGTACGTTCGATCAATGCCGACACCGCTGGAACGCACGAGGATCTGCGACGTGTGCTGCGCTATGTCGATCGAACGCGCCGTGATGGCTATGCCTGGATAGTCGGTGGGGTATTCCCCAATATCGGCTCGGTCGCGGTGCGGCTTCCCTTCAACGACATCCTCGACAAGCCGCTCGGGCTGATGGTCGCGGGGCCAGCCTGGCGCATCCGCACCGAACACCGCGCGCTCGGCACCATGCTGCGCGCCGAGTTGGCGCGATTTACCGGAAGGCTTGCGGTAGGCACCGATCGACCTTCTTGA
PROTEIN sequence
Length: 256
MARSVKSARRALEVLDLFEKLRRPAAIGEIAAMLGYPQSSTSFLLNDLRRTGYLNYDLETRCFAPTIRVALLGSWIHAGACGRDEISELLTGVRDLARMTTLLATQNGLDLQYVHVIETRQTPKLALRPGTLRPLCRGAGGLALLAERSDADIGRLVRSINADTAGTHEDLRRVLRYVDRTRRDGYAWIVGGVFPNIGSVAVRLPFNDILDKPLGLMVAGPAWRIRTEHRALGTMLRAELARFTGRLAVGTDRPS*