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SCNpilot_cont_500_bf_scaffold_1383_10

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 45 / 55 BSCG 44 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(9446..9895)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S6 n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=RS6_MAGSA similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 148.0
  • Bit_score: 178
  • Evalue 5.10e-42
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 148.0
  • Bit_score: 178
  • Evalue 1.60e-42
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 153.0
  • Bit_score: 261
  • Evalue 6.40e-67

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGGCACTTTACGAGAACGTCTTCATTGCGCGTCAGGATGTCCCGACGACGCAGGTGGAGACATTGACGAACCAGTTCGCGGAGCTGGTCACCAACCTGGGCGGCACCGTCTCCAAGAAGGAGTACTGGGGCCTGCGCTCGTTGACCTACCGCATCAAGAAGAACCGCAAGGGCCACTACACCCTGCTCAACATCGACGCCCCGTCGGCGGCGGTGAAGGAGCTGGAGCGCACGATGTCGATCAACGAAGACATCATCCGCTTCATCACGGTTCGCGTCGACGAGCTCGAGGAAGGTCCCTCGGCCGTCATGCAGCGCAGCGCCGAGAAGTCGGACCGTCCGGGCGGCGATCGTGGCGATCGCTGGGGCGACCGTCCGCCGCGCCGCGAGCGTCCGCGCTTCGGTGACGAAGGCGCAGCACCCGTCGCCACCCAAGGAGAAGAAGAATGA
PROTEIN sequence
Length: 150
MALYENVFIARQDVPTTQVETLTNQFAELVTNLGGTVSKKEYWGLRSLTYRIKKNRKGHYTLLNIDAPSAAVKELERTMSINEDIIRFITVRVDELEEGPSAVMQRSAEKSDRPGGDRGDRWGDRPPRRERPRFGDEGAAPVATQGEEE*