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SCNpilot_cont_500_bf_scaffold_1720_23

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 45 / 55 BSCG 44 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 23134..24099

Top 3 Functional Annotations

Value Algorithm Source
Putative Bug-like extracytoplasmic solute binding receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1XH88_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 313.0
  • Bit_score: 228
  • Evalue 7.10e-57
putative Bug-like extracytoplasmic solute binding receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 313.0
  • Bit_score: 228
  • Evalue 2.20e-57
Putative Bug-like extracytoplasmic solute binding receptor, TTT family {ECO:0000313|EMBL:AGU51881.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.6
  • Coverage: 313.0
  • Bit_score: 228
  • Evalue 9.90e-57

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGCTCAGACTCGTATTGGCGACGCTGCTTCTGGCGCTTGCCTCGACCGCCCGGGCCGAGACCTGGCCGGATCGTCCCATCAAGATCATCACGGCGGCCGGCCCCGGTGCGGCACTCGACACGCTGACCCGCAAGCTCGCCGAAGCCCTGCAGAAGGAACTCGGTCAGCCGGTGATCGTCGACAACAAGCCGGGCGCCAACCAGATCATCGCGGCAACAGCCTGCGCCAACGCCCGGCCCGACGGTTACACGTTCTGCACGACCGCCACGGAACCCTACACCAACAACGTCTTCCTTTTCCGCAACCTGCCCTATGATCCGACCAACGGCTTCGCGCCGGTCGCCATGTTGGCCAACCAGCTCGCGGGCATCGTGGTCCGCAAGGAGCTGGGAGCGGAGACGCTGCAGGACGTCGTCGCCTATTCGCGCGCCCATCCCGGCAAGCTGAACTGGGGATCGTACGGCATCGGCAGCAATTCCCACCTGTACCTCGAAGCCGTGCGCCAGGAGACGGGCTGGGCCGTGACGCACATTCCCTATCGCGACGTGACCAATCTGACCCAGGGCTTGCTGGCCAACGATGTCCAGCTCGCCTATGCCGTGCTCGACGACAAGATCCAGCGCCAGATCGCCGACGGTACGCTCAAATTGATCGCCTATGCCGGCACCGCCCGCTCCCCGCTCTATCCCGACGTGCCGACCTTCGAGGAGCTTGGCCTCGAAAGCTATCGCATCCGCGGATGGTATGGTCTGCTGGCACCGGCGGGAACACCGCCTGCAATCGTCGAACGCGTGAATCGCACTGCCATGGAGGTAATGAATTCACCCGACATGAAGACGATCCTTCAAGCGCTATCGGTAGCACCCGTCGCCGCCCACGCGCCGGCCGACATGGCGGCCAACATACGTCGCAACCGCGATGTCGTCGGCAGCTCACTCCAACGCGCCAACGTGCAAGCGCAATGA
PROTEIN sequence
Length: 322
MLRLVLATLLLALASTARAETWPDRPIKIITAAGPGAALDTLTRKLAEALQKELGQPVIVDNKPGANQIIAATACANARPDGYTFCTTATEPYTNNVFLFRNLPYDPTNGFAPVAMLANQLAGIVVRKELGAETLQDVVAYSRAHPGKLNWGSYGIGSNSHLYLEAVRQETGWAVTHIPYRDVTNLTQGLLANDVQLAYAVLDDKIQRQIADGTLKLIAYAGTARSPLYPDVPTFEELGLESYRIRGWYGLLAPAGTPPAIVERVNRTAMEVMNSPDMKTILQALSVAPVAAHAPADMAANIRRNRDVVGSSLQRANVQAQ*