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SCNpilot_cont_500_bf_scaffold_2913_12

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 45 / 55 BSCG 44 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(7755..8357)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6AS80_RHILS similarity UNIREF
DB: UNIREF100
  • Identity: 40.8
  • Coverage: 206.0
  • Bit_score: 150
  • Evalue 2.00e-33
HTH-type transcriptional repressor ComR {ECO:0000313|EMBL:CEJ14414.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 181.0
  • Bit_score: 191
  • Evalue 1.10e-45
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 206.0
  • Bit_score: 150
  • Evalue 6.30e-34

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Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 603
ATGCGAAACAGTACAGAAAATAAGCGGCCGCGCGGCCGGCCGCGGTCCTTCGATACCGAAGAGGTCCTGGAGCGCGTGCGCGGCGTGTTCATGGAGAAGGGCTTTGCCGCCGCCTCGCTCGACGAGCTGTCGGAAGCCGCCGGCCTCAACCGTCCCAGCCTCTACGCCGCCTTCGGCGACAAGGAGCAGCTCTACATCCAGACCTTGCGCCACTACGGCACGACGAGCATCGAAATGATGGACAAGGTGCTGGCCGGGCCGGGCACGATCGAGCAGCGCCTCGCCAAGGTCTACATGGCGGCGATCGATTTCTATACCGCGCCGCCCAGCAAGCTCGGCTGCATGATCGTGGGCACGGCGGCGGTGGAGTCGCCGACCCATCCCGAGATCGCCGCCGCCGCCGGCGAACTGCTGGCCGCGATCGAGAAGAGCCTGGAGCGCGCCTTCGCCGCGAGCAGCCTGCCGGCCGAGCCAACGCCGGCAGCGCGCGCCCGCATGGCCGGGGCGATCCTGTACGCCATCGCCATCCGCGCCCGCATCGGCATGAAGGGCTCGGAGCTGCGCGCCTTCGCCCATTCGATGGTGCCGGTGATCTGTCGGTAG
PROTEIN sequence
Length: 201
MRNSTENKRPRGRPRSFDTEEVLERVRGVFMEKGFAAASLDELSEAAGLNRPSLYAAFGDKEQLYIQTLRHYGTTSIEMMDKVLAGPGTIEQRLAKVYMAAIDFYTAPPSKLGCMIVGTAAVESPTHPEIAAAAGELLAAIEKSLERAFAASSLPAEPTPAARARMAGAILYAIAIRARIGMKGSELRAFAHSMVPVICR*