ggKbase home page

SCNpilot_cont_500_bf_scaffold_3403_5

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 45 / 55 BSCG 44 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 2853..3542

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002F70B13 similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 226.0
  • Bit_score: 299
  • Evalue 4.00e-78
Cyclic nucleotide-binding domain protein similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 229.0
  • Bit_score: 255
  • Evalue 2.10e-65
Transcriptional regulator {ECO:0000313|EMBL:KGD99366.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 229.0
  • Bit_score: 253
  • Evalue 2.70e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGAGGCCAATCAGCAGGGCTCGCGCCGAGCAGATCATGAGCGAGCGCGGCTGGCTGCCGTTGTTGCCGGACGTGTTCCGGACCGAAGTGCTGCGGCGCTCGGTCTTGCAGCATTTCGCTCCGGGCGAGCCGATATTCCATCTCGGCGAACCGGCGGGCGGGATCTACGGGCTTGTGGCGGGCACCGTCAGCGTCAGCCTAGCCCCGGCTGGCTCGACGCCGCGCCTGATCCTTTTGGGGATTCCGGGTCACTGGACCGGCGAAGCCTGCTTCCTCACCCGTAAGCCACGCCGGGGGGAGCTGAGGGCCGTCGTCGAAACGACCATGCTGCATCTTCCTCTTGATGCGATGGACCAGATGGCCGCGCGCGATCCGGAGATGATGCGTCATGTCGCGCTCATCTTGATGATGAGCGTCGAGTTCCTGTTCCGCGTGATCCACGATCTACAAAAGCCCGAGGCTGACCGGCGGATCGCCTCGGTGCTTCATCGCACGACGTGGATCGGAGAGACACCGATCCCGTTGACCCAGAGCGAGGTCGGCATCATGGCAAACGCCTCGCGCAAGCAGGTCAACGCCGCGATCAAGCGCTTCTCCGAGGCCGGATGGCTGACCAATACCTACCGTTCCATCACCATCACCAACCCGGGAGCACTCCGCCGCTTCGCCGAAGAAGACGGCACGAATTGA
PROTEIN sequence
Length: 230
MRPISRARAEQIMSERGWLPLLPDVFRTEVLRRSVLQHFAPGEPIFHLGEPAGGIYGLVAGTVSVSLAPAGSTPRLILLGIPGHWTGEACFLTRKPRRGELRAVVETTMLHLPLDAMDQMAARDPEMMRHVALILMMSVEFLFRVIHDLQKPEADRRIASVLHRTTWIGETPIPLTQSEVGIMANASRKQVNAAIKRFSEAGWLTNTYRSITITNPGALRRFAEEDGTN*