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SCNpilot_cont_500_bf_scaffold_3456_12

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 45 / 55 BSCG 44 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(9589..10326)

Top 3 Functional Annotations

Value Algorithm Source
Extra-cytoplasmic solute receptor n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LFG7_RALME similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 244.0
  • Bit_score: 201
  • Evalue 1.20e-48
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR75367.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 245.0
  • Bit_score: 248
  • Evalue 1.20e-62
bug; ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 244.0
  • Bit_score: 201
  • Evalue 3.80e-49

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
CTGTCGGTGAAGACCGCCCCGCCCGACGGCTATACCCTGATGCTGGCCACGACCTCGACCAACGCCGCCAACATCCACATGTACAAGAATCCGGGCTACGACCCGGAGAAGGACTTCCAGGTCGTCGGCATCATCGGCTCGAGCGGCGCCTTCCTCGTCGTGCCGGCGGACAATCCCTACAAGACGCTGGCCGACCTGCTGGCCGACGCCAAGGCAAGGCCCGGCAAACTCAACTTCGGCTACTTCAATGCGAGTTCGCAGGTGCCGGCCGAGGTGCTGGGCAAGCGTGCCGGCGTCGAGTGGCAGGGCGTGGCCTACAAGGCGATCGGCAACGCCTGGACCGATCTCTATGCCGGCGCCATCCAGTTCATGTTCGTCGACCTCACGGCCGGCCGTGGCCAGGTGGTGGCCGACAAGGCGCGACCGCTGGCCCTCACCCTGCCCCAGCGCAGCCCGCTCTATCCCAACCTGCCCACCCTGGCCGAAAGCTTCCCCGGCTTCACCAGCACCGGCTTTCTCGCCATCGCCGTGCCCAAGGCAACGCCGAAGCCGGTCCAGGAGCGCCTGAACACCTTGATCAACGAGGCGATCACCTCGCCCGAGATCGCCAAGCGCCTCGCCGAGGAGTTTGCGCTGACCTCGCGGGCGCTTACCCTGGAGCAATGCGCCCAGCAGGATCGCGACGAGCGCGCCAAGTGGGCGGAGTATGTGAAGATCGCCAAGATCGAGCCGCAGTAA
PROTEIN sequence
Length: 246
LSVKTAPPDGYTLMLATTSTNAANIHMYKNPGYDPEKDFQVVGIIGSSGAFLVVPADNPYKTLADLLADAKARPGKLNFGYFNASSQVPAEVLGKRAGVEWQGVAYKAIGNAWTDLYAGAIQFMFVDLTAGRGQVVADKARPLALTLPQRSPLYPNLPTLAESFPGFTSTGFLAIAVPKATPKPVQERLNTLINEAITSPEIAKRLAEEFALTSRALTLEQCAQQDRDERAKWAEYVKIAKIEPQ*